S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Msn4p	YML004C	PubMed Inoue Y et al., The Journal of biological chemistry, 1998 Jan 30;273(5):2977-83	Indirect	CAT - wt vs TF mutant	Positive	S288c	Stress	0,4M NaCl	N/A
		PubMed Garcia SC et al., FEMS microbiology letters, 2000 Mar 15;184(2):219-24	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Stress	YPD + 0,5M NaCl	N/A
		PubMed Cameroni E et al., Cell cycle (Georgetown, Tex.), 2004 Apr;3(4):462-8	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Carbon source quality/availability	diauxic shift	N/A
		PubMed Aguilera J et al., Molecular microbiology, 2005 Apr;56(1):228-39	Indirect	Northern blot - wt vs TF mutant	Positive	W303-1A	Stress	Cells were grown until mid-exponential phase (OD600= 0.4-0.6) and then methylglyoxal was added to a final concentration of 4 mM.	N/A
		PubMed Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Stress	YPD medium + 0,4M KCl (salt stress)	N/A
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	0.37710083565673