Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Gln3p YML116W PubMed external link Staschke KA et al., The Journal of biological chemistry, 2010 May 28;285(22):16893-911Staschke KA et al., The Journal of biological chemistry, 2010 May 28;285(22):16893-911 Indirect Microarray analysis - WT vs TF Deletion Positive WY798 Nitrogen source quality/availability Grown in synthetic medium (SD) (2% dextrose, 0.5% ammonium sulfate) + amino acids w/o histidine (SC medium). Cells treated for 1 h with 200 nM rapamycin. Transcription factor gene deletion. 1.47508488
Indirect Microarray analysis - WT vs TF Deletion Positive WY798 Unstressed log-phase growth (control) Grown in synthetic medium (SD) (2% dextrose, 0.5% ammonium sulfate) + amino acids w/o histidine (SC medium). Transcription factor gene deletion. 0.54847193
PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Positive BY4741; S288C; R1158 Unstressed log-phase growth (control) Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. 0.44200246098127
PubMed external link Yilmaz İU et al., Journal of trace elements in medicine and biology : organ of the Society for Minerals and Trace Elements (GMS), 2023 Sep;79():127222Yilmaz İU et al., Journal of trace elements in medicine and biology : organ of the Society for Minerals and Trace Elements (GMS), 2023 Sep;79():127222 Indirect RT-PCR - wt vs TF mutant Positive BY4741 Stress YPD medium + 20/50mM boric acid N/A