S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Bas1p	YML123C	PubMed Pinson B et al., Genes & development, 2009 Jun 15;23(12):1399-407	Direct	ChIP	N/A	ade16 ade17 double mutant	Unstressed log-phase growth (control)	SDcasaWAU medium	N/A
		PubMed Fendt SM et al., Molecular systems biology, 2010 Nov 30;6():432	Indirect	Microarray analysis - wt vs TF mutant	Negative	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Servant G et al., Nucleic acids research, 2012 Jul;40(12):5271-82	Indirect	Northern blot - wt vs TF mutant	Negative	S288c	Nitrogen source quality/availability	adenine depletion	N/A
		PubMed Weiner A et al., PLoS biology, 2012;10(7):e1001369	Indirect	Microarray analysis - wt vs TF mutant	Negative	S288c	Stress	Diamide exposure-45min	N/A
		PubMed Yi DG et al., FEBS letters, 2015 Aug 19;589(18):2409-16	Indirect	RNA-seq analysis - WT vs TF Deletion	Positive	SK1	Unstressed log-phase growth (control)	Cells from a stationary culture in YPD medium were inoculated into fresh YPD medium to a final concentration equivalent to an A 600 of 0.25, and grown at 30 °C for 12 h.	1.7355494357919
			Indirect	RNA-seq analysis - WT vs TF Deletion	Positive	SK1	Cell cycle/morphology	Cells were grown in YPA for 13.5–14 hr at 30°, harvested, resuspended in 2% potassium acetate, and sporulated at 30°. Then, 15 OD600 units of cells were collected at 4 hr in meiosis for RNAseq. Transcription factor gene deletion.	1.7355494357919
		PubMed Chow J et al., mSphere, 2019 Mar 6;4(2):	Indirect	Northern blot - wt vs TF mutant	Positive	BY4742	Nitrogen source quality/availability	SDcasaWU, adenine depletion	N/A