Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Msn4p YMR169C PubMed external link Navarro-Aviño JP et al., Yeast (Chichester, England), 1999 Jul;15(10A):829-42Navarro-Aviño JP et al., Yeast (Chichester, England), 1999 Jul;15(10A):829-42 Indirect lacZ - wt vs TF mutant Positive W303-1A Stress YPD medium, exponential phase; 2h incubation with 1M KCl N/A
PubMed external link Garcia SC et al., FEMS microbiology letters, 2000 Mar 15;184(2):219-24Garcia SC et al., FEMS microbiology letters, 2000 Mar 15;184(2):219-24 Indirect Microarray analysis - wt vs TF mutant Positive S288c Stress YPD + 0,5M NaCl N/A
PubMed external link Aranda A et al., Yeast (Chichester, England), 2003 Jun;20(8):747-59Aranda A et al., Yeast (Chichester, England), 2003 Jun;20(8):747-59 Indirect Northern blot - wt vs TF mutant Positive S288c Stress Acetaldehyde stress; Exponential-phase cells cultivated for 1 h in YPD supplemented with 1 g/L acetaldehyde N/A
PubMed external link Yamamoto A et al., The Journal of biological chemistry, 2005 Mar 25;280(12):11911-9Yamamoto A et al., The Journal of biological chemistry, 2005 Mar 25;280(12):11911-9 Indirect Northern blot - wt vs TF mutant Positive S288c Stress YPD medium 39ºC (heat shock) N/A
PubMed external link Lai LC et al., Molecular and cellular biology, 2005 May;25(10):4075-91Lai LC et al., Molecular and cellular biology, 2005 May;25(10):4075-91 Indirect Microarray analysis - wt vs TF mutant Positive S288c Oxygen availability SSGal-TEA medium + anaerobiosis (0,19 generations) N/A
PubMed external link Eastmond DL et al., The Journal of biological chemistry, 2006 Oct 27;281(43):32909-21Eastmond DL et al., The Journal of biological chemistry, 2006 Oct 27;281(43):32909-21 Indirect Microarray analysis - wt vs TF mutant Positive W303-1A Stress Cells grown in YPAD at 30.C to mid-log phase (A600 of 0.5) submitted to heat-shock (37.C, 15 min) N/A
PubMed external link Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6 Indirect Microarray analysis - wt vs TF mutant Positive S288c Stress YPD medium containing 0,8M glucose (glucose "osmotic" stress) N/A
PubMed external link Watanabe D et al., Applied and environmental microbiology, 2011 Feb;77(3):934-41Watanabe D et al., Applied and environmental microbiology, 2011 Feb;77(3):934-41 Indirect RT-PCR - wt vs TF mutant Positive S288c Complex industrial media Sake mash on day 5 N/A
PubMed external link Casado C et al., The Biochemical journal, 2011 Sep 15;438(3):523-33Casado C et al., The Biochemical journal, 2011 Sep 15;438(3):523-33 Indirect Microarray analysis - wt vs TF mutant Positive S288c Stress 10 min shift to pH=8 N/A
PubMed external link Weiner A et al., PLoS biology, 2012;10(7):e1001369Weiner A et al., PLoS biology, 2012;10(7):e1001369 Indirect Microarray analysis - wt vs TF mutant Positive S288c Stress Diamide exposure-45min N/A
PubMed external link Bai C et al., PloS one, 2020;15(8):e0237540Bai C et al., PloS one, 2020;15(8):e0237540 Indirect RT-PCR - wt vs. TF double mutant Positive BY4741 Stress YNB (-ura) + 0.7M NaCl (1 hour after exposure) N/A
Indirect RT-PCR - wt vs. TF double mutant Positive BY4741 Stress YPD + 0,7M NaCl (1 hour after exposure) N/A
Indirect RT-PCR - wt vs. TF quadruple mutant Positive SP1 Stress YNB (-ura) + 0.7M NaCl (1 hour after exposure) N/A
Indirect RT-PCR - wt vs. TF quadruple mutant Positive BY4741 Stress YPD + 0,7M NaCl (1 hour after exposure) N/A