Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Bas1p YMR189W PubMed external link Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804 Direct Chip-on-chip N/A S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c Unstressed log-phase growth (control) SC medium; mid-log phase N/A
PubMed external link Subramanian M et al., Molecular microbiology, 2005 Jul;57(1):53-69Subramanian M et al., Molecular microbiology, 2005 Jul;57(1):53-69 Indirect Microarray analysis - wt vs TF mutant N/A S288c N/A N/A N/A
PubMed external link Workman CT et al., Science (New York, N.Y.), 2006 May 19;312(5776):1054-9Workman CT et al., Science (New York, N.Y.), 2006 May 19;312(5776):1054-9 Direct Chip-on-chip N/A S288c N/A N/A N/A
PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Positive BY4741; S288C; R1158 Unstressed log-phase growth (control) Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. 1.1365323063159
PubMed external link Fendt SM et al., Molecular systems biology, 2010 Nov 30;6():432Fendt SM et al., Molecular systems biology, 2010 Nov 30;6():432 Indirect Microarray analysis - wt vs TF mutant Positive S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Yi DG et al., FEBS letters, 2015 Aug 19;589(18):2409-16Yi DG et al., FEBS letters, 2015 Aug 19;589(18):2409-16 Direct ChIP-seq N/A S288c Carbon source quality/availability YPA N/A
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 Unstressed log-phase growth (control) YPD medium, 25.C N/A