S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Ecm22p	YMR202W	PubMed Vik A et al., Molecular and cellular biology, 2001 Oct;21(19):6395-405	Direct	EMSA	N/A	W303-1a	In vitro	In vitro; interaction between DNA probes containing sequences from the ERG2 promoter and a truncated Upc2p(1-395) protein	N/A
			Indirect	Northern blot - wt vs TF mutant	Positive	W303-1a	Stress	Cells grown in minimal medium (16 h) with or without 40 microg/mL lovastatin	N/A
			Indirect	lacZ - wt vs TF mutant	Positive	W303-1a	Stress	Cells grown in minimal medium (16 h) with or without 40 microg/mL lovastatin	N/A
		PubMed Davies BS et al., Molecular and cellular biology, 2005 Aug;25(16):7375-85	Indirect	lacZ - wt vs TF mutant	Positive	JRY7180	Unstressed log-phase growth (control)	Complete synthetic medium (CSM; 0.67%Difco yeast nitrogen base without amino acids, complete supplemental mixture minus appropriate amino acids) containing 2% glucose; mid-log phase.	N/A
		PubMed Davies BS et al., Genetics, 2006 Sep;174(1):191-201	Indirect	RT-PCR - wt vs TF mutant	Positive	W303	Stress	Cells were grown aerobically in complete synthetic medium containing 2% glucose with ketoconazole	N/A
		PubMed Davies BS et al., Genetics, 2006 Sep;174(1):191-201	Indirect	RT-PCR - wt vs TF mutant	Positive	W303	Oxygen availability	Cells were grown in complete synthetic medium containing 2% glucose in tightly capped 50 ml flasks without shaking at 30. (hypoxic conditions) with hemin	N/A
		PubMed Chow J et al., Journal of fungi (Basel, Switzerland), 2018 Aug 9;4(3):	Indirect	RNA-seq - wt vs TF mutant	Positive	YS58	Unstressed log-phase growth (control)	wt and ECM22 overexpressing strain were grown at 30.C in YPD medium	N/A
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	Unstressed log-phase growth (control)	YPD medium, 25.C	N/A