S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Pho4p	YMR251W-A	PubMed Huang D et al., Molecular and cellular biology, 2002 Jul;22(14):5076-88	Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY263	Unstressed log-phase growth (control)	Yeast strains were grown in rich medium at 30°C to an optical density at 600 nm (OD600) of 0.5.	N/A
		PubMed Nishizawa M et al., PLoS biology, 2008 Dec 23;6(12):2817-30	Direct	Chip-on-chip	N/A	S288c	Ion/metal/phosphate/sulfur/vitamin availability	YNB medium without phosphate + 0,2microM (low Pi; phosphate limitation)	N/A
		PubMed van Heusden GPH, Genomics, 2023 Sep;115(5):110672	Indirect	RNA-seq analysis - WT vs TF Deletion	Positive	BY4741	Ion/metal/phosphate/sulfur/vitamin availability	Grown overnight at 30 °C in phosphate-free YNB medium supplemented with 7.2 mM potassium phosphate (pH 5.8), 20 mg/L histidine, leucine, methionine, and uracil, and 50 mM KCl, then used to inoculate 50 mL cultures at OD620 = 0.1 and grown at 30 °C, 180 rpm to OD620 = 0.5. Transcription factor gene deletion.	1.53240134844443