S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Met4p	YNL277W	PubMed Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	SC medium; mid-log phase	N/A
		PubMed Chua G et al., Proceedings of the National Academy of Sciences of the United States of America, 2006 Aug 8;103(32):12045-50	Indirect	Microarray analysis - wt vs TF overexpression	Positive	N/A	Carbon source quality/availability	Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h	N/A
		PubMed Thorsen M et al., Physiological genomics, 2007 Jun 19;30(1):35-43	Indirect	Microarray analysis - WT vs TF Deletion	Positive	W303-1A	Stress	Grown in minimal YNB medium (0.67% yeast nitrogen base) supplemented with auxotrophic requirements and 2% glucose at 30°C. Exponentially growing cells exposed to 0.2 mM sodium arsenite. Transcription factor gene deletion.	0.447
		PubMed Archer CT et al., Nucleic acids research, 2010 Jan;38(3):789-96	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303	Unstressed log-phase growth (control)	minimal B-media + 0.5 mM methionine	N/A
		PubMed Cormier L et al., Nucleic acids research, 2010 Aug;38(15):4998-5014	Direct	ChIP	N/A	W303	Stress	Isogenic strain expressing Myc-tagged version of Met4 was grown to early log phase in YPD medium and exposed to 0.5mM Cd2+.	N/A
		PubMed McIsaac RS et al., Molecular biology of the cell, 2011 Nov;22(22):4447-59	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Stress	pulse of beta-estradiol	N/A
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	Unstressed log-phase growth (control)	YPD medium, 25.C	N/A