S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Msn2p	YOL052C-A	PubMed MartÃnez-Pastor MT et al., EMBO J, 1996 May 1;15(9):2227-35	Indirect	LacZ - WT vs TF mutant	Positive	S288c	7% ethanol 20min
		PubMed Schmitt AP et al., Proc Natl Acad Sci U S A, 1996 Jun 11;93(12):5777-82	Indirect	Northern blot - WT vs TF overexpression	Positive	S288c	Methylmethane sulfonate stress
		PubMed Treger JM et al., J Biol Chem, 1998 Oct 9;273(41):26875-9	Indirect	Northern blot - WT vs TF mutant	Positive	JT659	Heat-shock treatment
		PubMed Rep M et al., J Biol Chem, 2000 Mar 24;275(12):8290-300	Indirect	Microarray analysis - WT vs TF mutant	Positive	S288c	YPD + 0,5M NaCl
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Lai LC et al., Mol Cell Biol, 2005 May;25(10):4075-91	Indirect	Microarray analysis - WT vs TF mutant	Negative	S288c	SSGal-TEA medium + anaerobiosis (2 generations)
		PubMed Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50	Indirect	Microarray analysis - WT vs TF overexpression	Positive	N/A	Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h
		PubMed Berry DB et al., Mol Biol Cell, 2008 Nov;19(11):4580-7	Indirect	RT-PCR - WT vs TF mutant	Positive	BY4741	YPD+0.7 M NaCl 45min
			Indirect	RT-PCR - WT vs TF mutant	Positive	BY4741	YPD e 30-37.C heat shock 15min
		PubMed Capaldi AP et al., Nat Genet, 2008;():Capaldi AP et al., Nat Genet, 2008;():	Indirect	Microarray analysis - WT vs TF mutant	Positive	S288c	YPD medium containing 0,8M glucose (glucose "osmotic" stress)
		PubMed Ni L et al., Genes Dev, 2009 Jun 1;23(11):1351-63	Direct	Chip-on-chip	N/A	S288c	SD medium + NaCl 0,6M 30'
		PubMed Kelley R et al., PLoS Genet, 2009 May;5(5):e1000488	Indirect	Microarray analysis - WT vs TF mutant	Positive	BY4741	YPD 30.C from 0.1 mM H2O2 to 0.4 mM H2O2
		PubMed Hansen AS et al., Mol Syst Biol, 2013;():	Indirect	Microarray analysis - WT vs TF mutant	Positive	S288c	1-NM-PP1
		PubMed Stewart-Ornstein J et al., Curr Biol, 2013 Dec 2;23(23):2336-45	Indirect	GFP - WT vs TF overexpression	Positive	S288c	Estradiol induced
		PubMed Elfving N et al., Nucleic Acids Res, 2014 May;42(9):5468-82	Indirect	Microarray analysis - WT vs TF overexpression	Positive	S288c	SD + glucose + estradiol induction
		PubMed Kuang Z et al., Elife, 2017 Sep 26;6(0):e29938	Direct	ChIP-seq	N/A	BY5764	YPD 30.C
		PubMed Pfanzagl V et al., Mol Biol Cell, 2018 Nov 15;29(23):2848-2862	Indirect	Microarray analysis - WT vs TF mutant	Positive	W303-1A	YPD 30.C