S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Rph1p	YOR386W	PubMed Jang YK et al., Molecular and cellular biology, 1999 Nov;19(11):7630-8	Indirect	lacZ - wt vs TF mutant	Negative	S288c	Stress	methylmethanesulphonate presence	N/A
		PubMed Liang CY et al., Nucleic acids research, 2011 May;39(10):4151-65	Direct	ChIP	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Liang CY et al., Molecular biology of the cell, 2013 Oct;24(20):3251-62	Indirect	RT-PCR - wt vs TF mutant	Negative	S288c	Unstressed log-phase growth (control)	YPD 30.C	N/A
		PubMed Li F et al., Nucleic acids research, 2017 May 19;45(9):5183-5197	Direct	ChIP	N/A	BY4741	Unstressed log-phase growth (control)	YPD	N/A
			Indirect	RT-PCR - wt vs TF overexpression	Negative	BY4741	Stress	YPD + methyl-methane sulphonate (MMS)	N/A
		PubMed Fang W et al., Cell reports, 2022 Apr 12;39(2):110672	Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	CEN.PK	Carbon source quality/availability	Yeast cells grown to log phase in YPL medium from 0.1 OD with switch to SL minimal medium for 3h. Transcription factor gene deletion.	-0.368664219091092