PubMed
Badis G et al., Molecular cell, 2008 Dec 26;32(6):878-87Badis G et al., Molecular cell, 2008 Dec 26;32(6):878-87
Direct
ChIP
N/A
S288c
N/A
N/A
N/A
PubMed
Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77
Indirect
Microarray analysis - WT vs TF Deletion
Negative
BY4741; S288C; R1158
Unstressed log-phase growth (control)
Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.
-0.70576132231161
PubMed
Hendler A et al., PLoS genetics, 2017 May;13(5):e1006778Hendler A et al., PLoS genetics, 2017 May;13(5):e1006778
Indirect
RNA-seq analysis - WT vs TF Deletion
Positive
15Daub
Unstressed log-phase growth (control)
Yeast strains were grown in rich medium at 30°C to an optical density at 600 nm (OD600) of 0.5.
0.381951429563581
Indirect
RNA-seq analysis - WT vs TF Deletion
Positive
15Daub
Unstressed log-phase growth (control)
Yeast growth media (yeast-peptone-dextrose [YPD], yeast-peptone-acetate, and synthetic complete) were of standard composition
0.459421612271494
Indirect
RNA-seq analysis - WT vs TF Deletion
Positive
15Daub
Cell cycle/morphology
Cells were grown in 7 ml of SC over-night at 30°C. Cells were synchronized by alpha factor arrest and release and immediately collected. Transcription factor gene deletion.
0.381951429563581
Indirect
RNA-seq analysis - WT vs TF Deletion
Positive
15Daub
Cell cycle/morphology
Cells were grown in 7 ml of SC over-night at 30°C. Cells were synchronized by alpha factor arrest and release and after 30 minutes they were collected. Transcription factor gene deletion.
