The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Group |
Environmental Condition |
Log2FC |
|
Msn4p
|
YPL223C
|
PubMed
Garay-Arroyo A et al., Yeast (Chichester, England), 1999 Jul;15(10A):879-92Garay-Arroyo A et al., Yeast (Chichester, England), 1999 Jul;15(10A):879-92 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
Stress |
0,4M NaCl 30min |
N/A |
PubMed
Garcia SC et al., FEMS microbiology letters, 2000 Mar 15;184(2):219-24Garcia SC et al., FEMS microbiology letters, 2000 Mar 15;184(2):219-24 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
Stress |
YPD + 0,5M NaCl |
N/A |
PubMed
Lai LC et al., Molecular and cellular biology, 2005 May;25(10):4075-91Lai LC et al., Molecular and cellular biology, 2005 May;25(10):4075-91 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
Oxygen availability |
SSGal-TEA medium + anaerobiosis (2 generations) |
N/A |
PubMed
Eastmond DL et al., The Journal of biological chemistry, 2006 Oct 27;281(43):32909-21Eastmond DL et al., The Journal of biological chemistry, 2006 Oct 27;281(43):32909-21 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
W303-1A |
Stress |
Cells grown in YPAD at 30.C to mid-log phase (A600 of 0.5) submitted to heat-shock (37.C, 15 min) |
N/A |
PubMed
Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
Stress |
YPD medium + 0,4M KCl (salt stress) |
N/A |
PubMed
Martínez-Montañés F et al., Eukaryotic cell, 2013 May;12(5):636-47Martínez-Montañés F et al., Eukaryotic cell, 2013 May;12(5):636-47 |
Direct |
ChIP |
N/A |
S288c |
Stress |
salt stress (NaCl shock) |
N/A |
|