Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Met4p YPR167C PubMed external link Thomas D et al., The Journal of biological chemistry, 1990 Sep 15;265(26):15518-24Thomas D et al., The Journal of biological chemistry, 1990 Sep 15;265(26):15518-24 Indirect Northern blot - wt vs TF mutant Positive CC362-2A Unstressed log-phase growth (control) Minimal medium N/A
PubMed external link Kuras L et al., The EMBO journal, 1997 May 1;16(9):2441-51Kuras L et al., The EMBO journal, 1997 May 1;16(9):2441-51 Direct DNA footprinting N/A S288c In vitro in vitro N/A
PubMed external link Aranda A et al., Applied and environmental microbiology, 2004 Apr;70(4):1913-22Aranda A et al., Applied and environmental microbiology, 2004 Apr;70(4):1913-22 Indirect Western blot - wt vs TF mutant Positive S288c Stress 1 g/L acetaldehyde (1H) N/A
PubMed external link Barbey R et al., The EMBO journal, 2005 Feb 9;24(3):521-32Barbey R et al., The EMBO journal, 2005 Feb 9;24(3):521-32 Indirect Northern blot - wt vs TF mutant Positive S288c Stress Rich YPD Medium + 0,5mM Cadmium N/A
PubMed external link Thorsen M et al., Physiological genomics, 2007 Jun 19;30(1):35-43Thorsen M et al., Physiological genomics, 2007 Jun 19;30(1):35-43 Indirect Microarray analysis - WT vs TF Deletion Positive W303-1A Stress Grown in minimal YNB medium (0.67% yeast nitrogen base) supplemented with auxotrophic requirements and 2% glucose at 30°C. Exponentially growing cells exposed to 0.2 mM sodium arsenite. Transcription factor gene deletion. 1.327
PubMed external link Archer CT et al., Nucleic acids research, 2010 Jan;38(3):789-96Archer CT et al., Nucleic acids research, 2010 Jan;38(3):789-96 Indirect Microarray analysis - wt vs TF mutant Positive W303 Ion/metal/phosphate/sulfur/vitamin availability B-media lacking any source of sulfur N/A
Indirect Microarray analysis - wt vs TF mutant Positive W303 Unstressed log-phase growth (control) minimal B-media + 0.5 mM methionine N/A
PubMed external link Cormier L et al., Nucleic acids research, 2010 Aug;38(15):4998-5014Cormier L et al., Nucleic acids research, 2010 Aug;38(15):4998-5014 Direct ChIP N/A W303 Stress Isogenic strain expressing Myc-tagged version of Met4 was grown to early log phase in YPD medium and exposed to 0.5mM Cd2+. N/A
PubMed external link Hickman MJ et al., Molecular biology of the cell, 2011 Nov;22(21):4192-204Hickman MJ et al., Molecular biology of the cell, 2011 Nov;22(21):4192-204 Indirect Microarray analysis - wt vs TF mutant Positive S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link McIsaac RS et al., Molecular biology of the cell, 2011 Nov;22(22):4447-59McIsaac RS et al., Molecular biology of the cell, 2011 Nov;22(22):4447-59 Indirect Microarray analysis - wt vs TF mutant Positive S288c Stress pulse of beta-estradiol N/A
PubMed external link Siggers T et al., Molecular systems biology, 2011 Dec 6;7():555Siggers T et al., Molecular systems biology, 2011 Dec 6;7():555 Direct PBM N/A S288c N/A N/A N/A
PubMed external link Prigent M et al., Nature communications, 2024 Aug 13;15(1):6927Prigent M et al., Nature communications, 2024 Aug 13;15(1):6927 Direct ChIP N/A BY4742 Ion/metal/phosphate/sulfur/vitamin availability SF medium (sulfur starvation) N/A