S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition	Log2FC
Hsf1p	YMR186W	PubMed Zarzov P et al., Journal of cell science, 1997 Aug;110 ( Pt 16)():1879-91	Indirect	Proteomics - wt vs TF mutant	Positive	S288c	24oC/37oC - heat shock	N/A
		PubMed Boy-Marcotte E et al., Molecular microbiology, 1999 Jul;33(2):274-83	Indirect	Proteomics - wt vs TF mutant	Positive	MYY290	Heat-shock: Exponential-phase cells shifted from 25C to 38C	N/A
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	N/A	N/A
		PubMed Chua G et al., Proceedings of the National Academy of Sciences of the United States of America, 2006 Aug 8;103(32):12045-50	Indirect	Microarray analysis - wt vs TF overexpression	Positive	N/A	Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h	N/A
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4741; S288C; R1158	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	1.3352588208541
		PubMed Solís EJ et al., Molecular cell, 2016 Jul 7;63(1):60-71	Indirect	Net-seq	Positive	S288c	basal conditions	N/A
		PubMed de Jonge WJ et al., The EMBO journal, 2017 Feb 1;36(3):274-290	Direct	ChIP	N/A	S288C	SC medium	N/A
			Indirect	RT-PCR - wt vs TF mutant	Negative	S288C	SC medium	N/A
		PubMed Pincus D et al., Molecular biology of the cell, 2018 Dec 15;29(26):3168-3182	Direct	ChIP-seq	N/A	BY4741	YPDA (with 0.002% adenine), non-heat shock, 5Â´heat shock and 120Â´heat shock	N/A
			Direct	ChIP-seq	N/A	BY4741	YPDA (with 0.002% adenine) Rapamycin (1 microM), non-heat shock	N/A
			Direct	ChIP-seq	N/A	BY4741	YPDA (with 0.002% adenine), 5' heat shock	N/A
			Indirect	NAC-seq (nascent mRNA-sequencing)	Positive	BY4741	YPDA (with 0.002% adenine) Rapamycin (1 microM), non-heat shock	N/A
			Indirect	NAC-seq (nascent mRNA-sequencing)	Positive	BY4741	YPDA (with 0.002% adenine), 5' heat shock	N/A
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C	N/A