S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Yap5p	YPL283C	PubMed Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Horak CE et al., Genes & development, 2002 Dec 1;16(23):3017-33	Direct	Chip-on-chip	N/A	S288c	N/A	N/A	N/A
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	0.35364648534137
		PubMed Pimentel C et al., PloS one, 2012;7(5):e37434	Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4742	Stress	Grown in synthetic media (SC: 0.67% ammonium sulphate-yeast nitrogen base without amino acids, 2% glucose, supplemented with the appropriate selective amino acids). Early log-phase cultures (A600=0.4) were exposed to 2mM of FeSO4 for 20 min. Transcription factor gene deletion.	0.220577
		PubMed Pimentel C et al., PloS one, 2012;7(5):e37434	Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4742	Stress	Grown in synthetic media (SC: 0.67% ammonium sulphate-yeast nitrogen base without amino acids, 2% glucose, supplemented with the appropriate selective amino acids). Early log-phase cultures (A600=0.4) were exposed to 2mM of FeSO4 for 60 min. Transcription factor gene deletion.	0.258492