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Modelling prediction
Essentiality
[metab] Optimisation
manipulating gene expression
manipulating TF expression
Cross species
Promoter analysis
Homologous network
Network comparison
Rank by Unique TFBS
Rank genes
Rank by TF
Rank by GO
Regulatory Associations
Search for TFs
Search for Genes
Search for Associations
Pattern Matching
Search by DNA Motif
Find TF Binding Site(s)
Utilities
Search for Orthologs
IUPAC Code Generation
ORF List ⇔ Gene List
Retrieve
TF-Consensus List
Regulation Matrix
Upstream Sequence
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Contact/Credits
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Terms of Usage
Acknowledgments
Data submission form
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Discoverer Tools
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Job Description:
ORFs/Gene Name List
Specify Parameters
MUSA integrated support has been discontinued!
To run it locally on your computer please download it
here
.
Search both strands
Minimum number of sequences (sieve rate):
0
1
2
3
4
5
6
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9
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13
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100
%
Lambda parameter (size of lambda-mers):
3
4
5
Epsilon parameter (distance tolerance):
0
1
Minimum distance between lambda-mers:
Maximum distance between lambda-mers:
Maximum p-value for assessment of relevant motifs
for family generation: