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Modelling prediction
Essentiality
[metab] Optimisation
manipulating gene expression
manipulating TF expression
Cross species
Promoter analysis
Homologous network
Network comparison
Rank by Unique TFBS
Rank genes
Rank by TF
Rank by GO
Regulatory Associations
Search for TFs
Search for Genes
Search for Associations
Pattern Matching
Search by DNA Motif
Find TF Binding Site(s)
Utilities
Search for Orthologs
IUPAC Code Generation
ORF List ⇔ Gene List
Retrieve
TF-Consensus List
Regulation Matrix
Upstream Sequence
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Predict essentiality
Considering the metabolic
model/medium
:
Model:
Yeast8 v8.5.0
Medium:
Synthetic Minimal medium
Glucose rich SC medium
Type:
Genes
TFs
Reactions
Considering TF documented regulations with:
Expression evidence
TF acting as activator
TF acting as inhibitor
DNA binding
and
expression evidence