Yeastract IST IBB-BSRG INESC-ID
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Transcription Factor Binding Site Reference(s)

The Yeastract team, is actively curating each transcriptor factor binding site evidence code and environmental condition.
Transcription
Factor
Binding Site References Source Evidence
Code
Environmental
Condition
Pdr3p TCCGTGGA PubMed external link Katzmann DJ et al., J Biol Chem, 1996;271(38):23049-54Katzmann DJ et al., J Biol Chem, 1996;271(38):23049-54
PubMed external link Mahé Y et al., Mol Microbiol, 1996;20(1):109-17Mahé Y et al., Mol Microbiol, 1996;20(1):109-17
PubMed external link Mamnun YM et al., Mol Microbiol, 2002;46(5):1429-40Mamnun YM et al., Mol Microbiol, 2002;46(5):1429-40
PubMed external link Wolfger H et al., FEBS Lett, 1997;418(3):269-74Wolfger H et al., FEBS Lett, 1997;418(3):269-74
BSRG curated

Consensus sequences are
represented according to
the following IUPAC
frequency table:

IUPAC frequency table
A C G T
A 1 0 0 0
C 0 1 0 0
G 0 0 1 0
T 0 0 0 1
W1/2 0 0 1/2
S 0 1/21/2 0
R1/2 0 1/2 0
Y 0 1/2 0 1/2
M1/21/2 0 0
K 0 0 1/21/2
B 0 1/31/31/3
D1/3 0 1/31/3
H1/31/3 0 1/3
V1/31/31/3 0
N1/41/41/41/4
x1/41/41/41/4
a1/21/61/61/6
c1/61/21/61/6
g1/61/61/21/6
t1/61/61/61/2
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