Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
PTA1 Systematic Name
YAL043C Alias
FUN39 Strain
S288c Description
Subunit of holo-CPF; holo-CPF is a multiprotein complex and functional homolog of mammalian CPSF, required for the cleavage and polyadenylation of mRNA and snoRNA 3' ends; involved in pre-tRNA processing; binds to the phosphorylated CTD of RNAPII External sources
Open in SGD
Open in KEGG
Gene Sequence
Download FASTA Hide Seq
>PTA1 YAL043C
ATGTCATCTGCAGAGATGGAACAATTGTTACAGGCCAAGACACTGGCCATGCACAACAAT
CCAACGGAGATGCTGCCCAAGGTGCTCGAAACTACGGCATCCATGTACCACAACGGTAAT
CTCAGCAAGCTGAAGTTGCCTTTGGCCAAGTTTTTTACACAGTTAGTTCTAGACGTGGTG
TCGATGGACTCTCCAATTGCGAATACTGAGAGACCGTTTATTGCTGCTCAATATCTGCCA
CTACTTCTTGCTATGGCGCAATCCACCGCGGACGTACTAGTGTACAAGAATATCGTGCTT
ATTATGTGCGCTTCATACCCGCTGGTGTTGGATCTGGTTGCTAAGACATCAAACCAGGAA
ATGTTTGATCAGTTGTGTATGCTGAAGAAGTTCGTGCTCTCGCACTGGAGAACTGCATAT
CCTTTGCGTGCCACCGTTGACGATGAAACGGATGTCGAACAATGGCTGGCGCAGATTGAC
CAAAATATCGGCGTGAAATTAGCGACCATCAAGTTCATATCTGAGGTCGTGCTGTCGCAA
ACTAAATCACCCAGCGGCAACGAGATTAATTCATCTACCATCCCGGATAACCACCCTGTG
TTGAACAAACCGGCTTTGGAGAGCGAGGCTAAGAGGCTTCTTGATATGTTGCTAAACTAC
CTAATTGAGGAACAGTACATGGTCTCGTCCGTTTTCATTGGTATCATCAATTCTTTATCC
TTCGTCATCAAAAGAAGGCCGCAGACAACAATAAGAATTCTTTCCGGGCTGTTGCGTTTC
AACGTCGACGCCAAGTTTCCCCTAGAGGGCAAGTCTGACTTGAACTACAAACTATCCAAG
AGATTTGTTGAAAGGGCGTACAAGAACTTTGTGCAATTTGGGCTAAAAAATCAAATCATT
ACAAAATCCCTCTCATCCGGATCAGGGTCATCGATCTACTCCAAGCTGACCAAGATTTCT
CAAACTTTACACGTTATTGGCGAAGAGACCAAGAGCAAGGGAATTTTGAACTTCGACCCT
TCCAAGGGCAATAGCAAGAAAACGTTGTCCAGGCAGGACAAACTAAAATACATCTCACTA
TGGAAAAGGCAATTATCCGCGTTATTGTCTACTCTAGGGGTGTCCACAAAGACCCCCACG
CCTGTGTCCGCACCTGCAACGGGCTCTTCAACCGAAAACATGCTTGATCAACTGAAGATA
TTGCAAAAATACACCCTCAACAAGGCTTCACACCAGGGCAATACTTTTTTCAACAACTCA
CCCAAACCAATCAGCAACACCTACTCATCTGTGTACTCATTGATGAACAGTTCGAACTCC
AACCAGGATGTGACCCAGCTACCCAATGACATACTTATCAAGCTGTCCACAGAGGCCATC
TTGCAAATGGACAGCACGAAACTGATCACCGGATTGTCTATCGTTGCTTCGAGGTACACG
GATTTAATGAATACGTACATCAATTCTGTACCGTCCTCGTCATCATCAAAGAGGAAATCC
GACGATGATGACGACGGCAACGACAATGAAGAAGTTGGAAACGATGGCCCAACGGCTAAT
AGCAAGAAAATCAAAATGGAAACAGAACCACTAGCGGAGGAACCAGAGGAGCCCGAAGAC
GATGACCGAATGCAGAAGATGCTTCAAGAAGAGGAAAGCGCCCAAGAAATCTCAGGAGAT
GCCAACAAATCAACTTCTGCCATTAAGGAGATCGCACCCCCCTTTGAACCTGACTCATTG
ACGCAGGATGAAAAACTAAAGTACCTCTCAAAGCTGACCAAGAAACTGTTTGAATTATCC
GGTCGCCAGGATACTACCCGGGCCAAATCTTCGTCTTCCTCCTCCATATTACTGGACGAT
GACGACTCCTCGTCATGGTTACACGTCTTAATCAGATTGGTTACGAGAGGAATCGAAGCA
CAAGAGGCCAGTGACCTGATTCGTGAAGAACTGCTTGGCTTCTTCATCCAGGATTTCGAG
CAACGTGTCAGTCTGATCATTGAATGGCTCAATGAAGAATGGTTCTTCCAAACCTCGCTG
CATCAAGATCCCTCTAACTACAAAAAATGGTCCTTAAGAGTTCTCGAGTCTCTGGGTCCA
TTCCTTGAAAACAAACACAGACGATTCTTCATCAGACTTATGAGCGAACTGCCCAGTCTT
CAAAGCGATCATCTTGAGGCACTGAAGCCTATCTGCCTGGATCCGGCAAGAAGTTCCCTT
GGTTTCCAAACGCTAAAGTTTCTCATTATGTTTAGACCCCCAGTGCAGGACACTGTTCGC
GACCTGCTGCATCAGCTAAAGCAAGAAGATGAAGGCTTACACAAGCAGTGCGATTCACTG
CTTGACAGGCTAAAATGA Promoter Sequence
Download FASTA
>PTA1 YAL043C
GAAGTCTTGTCGTACAAAGAAGTATCATGAAAATGTCCATATGCATTCTGGTAGGGTTTT
CCAGGGGCAAAGTGAAGATTCCCCTGAATTCTGTTAATTTGTGCAGAACCTTTGATCCTG
CAGCCTTCATTCAAGTGCTCGTTAATCTTGCTGACATAGCCCTCTCTTTCACACTGCTCG
ATATTCTTCCCGTCGAAAAAAGCCCAGCCTGCCTCCAAGTATGCTGATCTCACTGCATCA
CAGTCTTGGCAGCAAACCTTCTCTTCCTGTGCTAGATTCTCATTCTGCGACTGATCTTTG
GCACCGTAACATGGCCCACAATAGTTAGGATCGTTATTAACCGGCGCGGTTCCGTCGCCG
TTCCCACCCACATGCAACTCAGTAGCATCTCCCACGGGGCGACCCTCGCTATTCAACCTA
GACATCGTGAACCCTGCGTCAAGAATGTCTAGTTGCATCTCTCCAGAGTCGTCCATAATA
TCGAGATTCACCAGGTCACATGGCATCGATGGAAATGTCACATCCATATTAAGCTCCAGC
TTTGCGTGTCGGTCACGGTCCACCACCAATTGTGGCCTTGTTACCACAGAATTGAACTGT
CCCCACTCGTTCACCAGCAGAAATAACGTGGTCAAGATGCACGATAAAGTGATCAGCCCG
CCGGCCCTGGTGCGGACTCGTACGTCCTCTTCGGTCTTAGCGAATGCGTCCAGCGACAGC
AACGTGGACCTTTTCATGATGTCTATTGTGTCTAGCTATGTGTGTTATATCACTGTCCTA
CTCCGCATGTATACGAGACATAAAACTAGCTTTCCTTTATAATGGCGTGGTTTCCACTCC
ATCTTGATGGAAAATCGCCGTTCTGATGTTCAAGTCGTATATAGTGACTTGATCTAAAAG
TGAAAAGTTGCCATATTTCGATACCTTTTAACCGTTAGTACTTGACTGAACAAATGGTTA
AATCGTGGCAAGAAGCATATAACTACCACTAAGCAGCGCA
Chr coordinates
Chr I from 61052-58695
