Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
TDP1
Systematic Name
YBR223C
Strain
S288c
Description
Tyrosyl-DNA phosphodiesterase I; hydrolyzes 3' and 5'-phosphotyrosyl bonds; involved in the repair of DNA lesions created by topo I and topo II; mutations in the human homolog, TDP1, result in the a neurodegenerative disease, spinocerebellar ataxia with axonal neuropathy (SCAN1); yeast cells and human rhabdomyosarcoma lines that overexpress TDP1 both exhibit elevated dosage chromosomal instability (dCIN)
External sources
Open in SGD
Open in KEGG
Gene Sequence
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>TDP1 YBR223C
ATGTCACGAGAAACAAATTTCAATGGAACTAAGAGGAAGAGGTCGGATGTTGCCGAGAAA
GTAGCACAACGGTGGAAGAGCGTCAGGTATAGTGCTGAAATGGAGAATATGGCTCCGGTC
AACAGTAACAATGATAGCGACGACTGCGTCATAGTCAGTGAATCGAAAATCATTGATTTG
ACTAATCAGGAACAAGATTTGAGTGAGAGAATAGAAACAAACGATACGGCAAAAGGTGCC
GTTTTTAAACTAATGAAATCGGACTTCTATGAAAGAGAGGATTTTATGGGAGAAGTAGAG
GATATGATTACATTGAAAGATATCTTTGGCACTGAGACACTAAAAAGAAGCATACTCTTC
AGTTTCCAATACGAACTTGATTTCTTGTTGAGACAATTCCACCAGAACGTAGAGAACATA
ACCATCGTCGGCCAAAAGGGTACTATTATGCCTATCGAAGCCCGTGCTATGGACGCGACA
CTGGCAGTAATATTAAAAAAGGTCAAACTTATTGAAATAACGATGCCCCCATTCGCTTCC
CACCATACGAAGCTGATCATAAACTTTTACGATAATGGCGAATGCAAAATATTCTTGCCA
TCTAACAATTTTACGTCAATGGAGACTAACCTGCCTCAACAGGTGTGTTGGTGCAGTCCC
CTTTTGAAAATAGGTAAAGAAGGGCTACCAGTACCGTTTAAGAGAAGCTTGATAGAATAC
CTCAATTCGTACCACCTGAAAGACATTGACGAATTGATTACAAAAAGCGTAGAGGAAGTT
AACTTTGCTCCTTTGAGCGAATTAGAATTTGTATATTCTACGCCCTCCAAATTTCAGTCG
TCGGGTTTACTGTCGTTTTACAATAAACTAGAAAAACTTTCTGCTGGCACAAGTGCTAGT
GATACTGCAAAACATTATCTATGTCAAACTTCATCCATAGGGACATCTCTATCAAGAGCG
CGAGACGAAAACTTATGGACACATCTAATGATTCCTCTGTTTACCGGAATCATGTCCCCT
CCAGCAAAGGACACCGCTGGGAGGAAGAAAGCAGAAATACTGCCAACGAATTCATTGATT
AATGAATATTCGCAGAGAAAAATCAAGCCGTACATTATTTTCCCCACCGAACAAGAGTTT
GTCACCAGTCCCTTAAAGTGGTCCAGTTCCGGGTGGTTTCATTTTCAATATCTTCAGAAA
AAGAGCTACTACGAAATGCTGCGAAACAAGTTCAAAGTATTTTACAAGCAAGACCCTGCT
ATGGTTACTAGAAGACGAGGGACGACGCCCGCGCACTCTAAGTTTTACATGCATTGTGCA
ACAAACTCCGCAGGGCCCTGTGATGCATCGCAGGTATTTAAAGAACTAGAATGGTGCCTT
TATACTTCGGCAAACCTCAGCCAAACAGCATGGGGCACCGTTTCAAGAAAACCACGCAAT
TATGAAGCAGGAGTGCTTTACCATAGTCGCAGGTTAGCAAATACCAGGAAGGTCACGTGC
CGTACTTTTACACGTGACCGTAGAGGCTGCGCGGGTAATCCCACCCATGTGGCCGTGCCA
TTCACGCTGCCAGTCATACCATACGACTTAGCTGAGGACGAGTGCTTTTGCCTTGCTCGT
CATGAGAACGACTAA
Promoter Sequence
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>TDP1 YBR223C
ATGCAAATGTTGATTAAATTATGATTTCCTGAAACGGTTTTGATTAGAAGAGAAGAATCT
GATGCCGGTAAAGTGTTCCAGTCCCATTTTTTTCTAGAATGGAGTTTCTTGACAACGTTC
GAAGTTGCACCGTGTAGACCACCACCTCCCCGGCCATTGCCGACCATATTGGATACAATG
AATCGCGGTGCAGAAGGGTCTGGTGAGTAATTAGCTTTCACTTCGGAAGTCGGAGTTCCG
CTTCTATGACTATGTTTATTATTACTTGTATGATGATGATGTAGACCTATTTTGGAAAGC
TGAGCGGACTTCAGTTTGGATACTGAGGATGAGGCAGCGGAGTCAGATGATCGTCTTGAC
GAGTTTGAGAACAAGTCATCCGCCAGTCTAAAGTTTGGCAAATGTAAGGGCGAATCAAAG
GACGAGAGCTTATCTGAATGATGGCTTACTTGTGGTGAGTGTGATTCTACTGAACTACTT
GATTGCGTGGTTCCATTTCTACTCTCTTTTTCTTGTTTCCCCTTTTCTTTGTCAGCATTT
TTATGTTCAGTAATCATTGAACTTGTATGGTTATCATGTGCTTTTAAGTTGGAAATTTTG
TTACTGGTTATACTGGTTAACCCCCTATCATTCTTACTATCAATGTTTTTTGCTTCCTTA
TTGGAGCCCATTGTATTTACTTGAGCAGTTTATAAAAAGTGGATAAATGAGGGGAAAAAT
AATAAAAAAGAAAATTGAACAATCCTTCAATATGTGTCCTTTAATAATTACTACTACTTT
ACACACTTCTCCAGTAGCTGCTGCTTGTTTCAGGTGATGTGAACAACGTGTTTCAGCGTT
CTTGGTAAGTGTTGGTATGGATCCCTTCTGATGTATTTTCGGCGGCCGCACTAAACTGCG
AAAATGGTAATTTAATAAAGGGCTTATAAAGAGGAAAATAATGCAGAGAAACGGTGAGCC
CAGACAAGAATGATGATAATGTGTTTTCAACCGATCATTA
Chr coordinates
Chr II from 670297-668663