Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
RTR1 Systematic Name
YER139C Strain
S288c Description
Dual specificity protein phosphatase; dephosphorylates T1 and S5 in C-terminal domain (CTD) of RNA polymerase II largest subunit, Rpo21p; autoregulates turnover of its mRNA; has a cysteine-rich motif required for function and conserved in eukaryotes; shuttles between the nucleus and cytoplasm; RTR1 has a paralog, RTR2, that arose from the whole genome duplication External sources
Open in SGD
Open in KEGG
Gene Sequence
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>RTR1 YER139C
ATGGCGACGATTGAAGATATTAAGGAAACGGCGTTAATCCCTTTCCAAAAGCACAGGCAA
CTTTCCATGCATGAAGCAGAAGTTATAACTTTAGAGATTATAGGCTTATTATGTGATTCA
GAATGCAAGGATGAGAAAACATTGAAATATTTGGGCCGATTTCTCACACCGGATATGTAT
CAAGACCTAGTAGATGAGAGGAATCTAAACAAAAGATGCGGATATCCTCTTTGCGGTAAA
TCGCCAGAAAGAATACGTGATCCATTTTCAATGAATGATACTACTAAGAAATTTTTATTA
GAAAACAATCCGTATGCATATTTGTCGCACTATTGCAGTAAGTTCCATTTTAGATGTTCC
CAATTTTATCAAGTGCAACTATCTGATGAAGCTTTATTTGCAAGAACAGGGGTTCACCTA
TTTGAAGATCCTGAACAGGACAAACACGATATAGATTTCAAAGTGACTTTGTTTGAAGAG
TTGCTAAGAGAAAAGGCATCCGAAGAAGACATTAAATCATTGATATCCGGTCTCAAAAAG
TTAGGATTAAATCCTGACAGTGGGACTACAGAAAAAGATGATACTGAGCTGGAAGATGAT
TTATCGAAGTGGTTGGCACAAATCAAAATTGTTGAGAATGATAATCCCAGCATTTTGGGT
GATTTCACAAGGGAAGATTGA Promoter Sequence
Download FASTA
>RTR1 YER139C
ACACTAACAAACATTTATGCAGTAATATCCGTTCCGAGTTTTTCCTAGAAAGCATAACCG
TTAATAAGCTCTGGCCCAAACTTGCCAACATTTTGTCCGCCATTTCCAGTACACTGAATA
GCATGTACAATTTCATCGTACTTTGCCGTTTTATCCTGTGATATAGTTTTGAGGTGTCTA
GTTTGCTCAACAAAATGGATGAAATCACGATGATAAAAATCATACATCTCTCTTTATATT
CTCTTGAAGTTATTCTATATCGAAAGGGTATTTTATTCTTATGCCCAGACCGTTGTTGCA
GGCGATAATGCTGACGATAACTCTTGAATTGCTTTACATATCCCTTTATCAGTCGTATCG
GTAATACAGTAAAGTAATACAAAAAACAGTCCAAGCTTGTTAAAAGTGCAAAGAGCATGA
ACTTTTCCAGGAACATTGGTATTCTTATCATGTTGAGTAATTGTTCCAATTCATAATCAT
CCTCATGTTCTTCTTCGCTTTTTGCAGCGCTACTTTCATCTTGCTCTTCAACAATATTGT
GTCTATCTATAGTATTCCATAGGAAGGACCACTTTTTGTCTAATCGTGAAATTATATGTA
TAGCTGACGGCGCACTATTTCTTCTCAGTAAACGTTTTTTAGCTGTGTCCTTCGCTACTG
CCGTATCCTTGTGTTGCATGGGAGTGCTGCTTTTTTTTTGGATTACTCGGTAGAATAATA
TATACACCTTATAGATCGATCAGGTCGATTCAGAGACAGCATCGTGATATTAAAAGTAAC
TAATTTTCTTATTTCATCTCTTTCCGATATTTTTGTCCGAAATAGGAATACTACAATACA
AAATCAGCTGGCATCCAGAAGTGGTCAAAAGCAATGGAAAAGTGAAGAAAGAGACACATT
GAGGAGCGAATTGAACAATTCATAAACATTCCCAGTCTAAAATATCTATACATCGGCATC
TTAGTTTGAAAAATTAGGACGAAGTTAACAAGAATAAGAA
Chr coordinates
Chr V from 451243-450563
