Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Metabolism
Standard Name
DEG1 Systematic Name
YFL001W Alias
HRM3, PUS3 Strain
S288c Description
tRNA:pseudouridine synthase; introduces pseudouridines at position 38 or 39 in tRNA; also responsible for pseudouracil modification of some mRNAs; important for maintenance of translation efficiency and normal cell growth, localizes to both the nucleus and cytoplasm; non-essential for viability External sources
Open in SGD
Open in KEGG
Gene Sequence
Download FASTA Hide Seq
>DEG1 YFL001W
ATGAGTAATTTCATTAGAAGGCTAGTTGGGAAAATGAAAGCGATTTCAACAGGTACCAAT
GCTATTGTTAGTAAGAAGGACTCCATTTACGCAAACTGGTCCAAAGAGCAGCTAATACGA
AGGATCACTGAACTAGAAAACGCAAATAAGCCACATTCTGAAAAATTCCAGCACATCGAG
GATAACAAAAAGCGCAAAATTTCGCAAGAAGAGGTTACGAGAAGCAAGGCGAAAAAGGCT
CCGAAGAAGTTTGACTTTTCTAAACATAATACCAGGTTCATCGCCTTGAGATTTGCCTAT
TTGGGATGGAATTACAATGGCTTAGCTGTTCAGAAGGAATACACACCGTTGCCTACAGTA
GAGGGTACCATTTTGGAGGCCATGAATAAGTGTAAACTTGTTCCCTCGATGGTTTTACAA
GACTATAAATTTAGCAGATGTGGCAGAACAGACAAGGGAGTTAGCGCCATGAACCAAGTT
ATATCGTTAGAAGTCCGTTCCAATTTAACAGATGAGGAACAGCGGGATCCGACCAACGAC
AGCAGGGAAATACCCTATGTTCACGTTTTAAATCAATTACTACCCGACGATATTCGTATA
TCAGCTGTCTGCCTCAGACCGCCACCTAACTTTGACGCAAGATTCAGCTGTGTTCACCGG
CACTATAAGTACATCTTTAATGGAAAAAACCTTAATATTGAAAAAATGTCTAAAGCCGCA
TCATATTTTGTTGGAGAGAGAGACTTCAGGAATTTTTGTAAGCTTGATGGCTCAAAACAA
ATTACCAATTTTAAACGAACAATAATAAGCTCAAAAATTCTTCCCCTTTCTGAAACTTTC
TATTGTTTTGATCTCGTTGGTTCAGCATTCCTATGGCACCAAGTTCGTTGCATGATGGCC
ATTCTTTTCTTAGTTGGTCAATCACTTGAAGTGCCGGAAATTGTCTTGCGTCTGACTGAT
ATTGAGAAAACCCCTCAAAGGCCTGTTTACGAAATGGCAAATGATATACCATTATTGTTA
TATGATTGTAAATTTCCTGAAATGGATTGGCAAGAACCTACTGTAGATGACTATAAGGCA
ATAAAATTCACGACAGCTACTGAAGCATTGACGTTACACTACGAACTTAAGGCCGCAGTA
TGCAATATTTTTAAAGATGTTTTGCCCACAGCAAATACAAACAACTTCTCAAAGACAATT
ATTAATTTGGGCGATGGAAGAGGTAAAGTAGTCGGTACCTATGTGAAACTAGAGGATAGA
AGCGTTATGGAACCTGTCGAAGTTGTTAATGCTAAATACTCCAAGAAAAAGAACAACAAA
AATAAGTAA Promoter Sequence
Download FASTA
>DEG1 YFL001W
AAAATATACAATACATTTCTTGAATTTGTAGTTATTCAAAATGCTAACCAAAAGTTGTAG
TTTTTCGGCAGGATTTACGACACAGTAATTTAATTTCAAAGAGGAGGGCGCCTGGTTCTT
AGAGTTAACGGTAATCCTGACAGGATTTCTAAGCCCTGTCTTAAAGATATCTGATCCGGC
GCTACGCATAGTTGCAGAAAATAGACCCGTCCTTCTTTGTTTAGGCAATAGCCTCAGAAT
TTTTTCGGTATCCTTAATAAAACTCATATCCAACAATCTGTCTGCTTCATCCATAACTAC
CATACTGCATGCTGACGTCTTTACTGCTGGCATTTGTAAAAAGTCCAAAACTCTACCAGG
TGTTCCAATCAGAATCTGCGGTCTATTCCGCAGAAAATTACTTACATCATCTCTAACTGT
GGCTTCATTAGTACCAACCAGGAGCTGACATTTAATAGGGAACAAGTCGGAAGGATAATG
TTCCAGAAATGATAGAACGACAGACTCAATTTGGCGTGACAATTCTCTTGTTGGAGCAAT
AATTAACGAGTGGAAGTGTGCTTTCTTGAATTTTGATGTATTCGCTTCTTCCTTTACAAC
TTTTTCTAGTACAGGTATAACAAACGCAGCGGTCTTACCTGAGCCTGTTACAGAATCAAC
TACTACATCCTTGTTGCCAGCAAGCATGGGAATTGTCGATGCTTGGACTGGAGTCATGGT
CTCAAAACCCATAACATCGAGTCCTGTCCTTATCCAGGGAAGTAAAGAAAACCCGAGATT
ATCCCATTCCAATGACTTTGACATTGTTTTTATTGCTGCTGAGCTTTTAATATTATCTTA
CTACACCTCAAATCAATGGGCTCAGCTCATCTTGAAAAGCTCACTTTGTTTTTCAGTGAA
AAATTTTTGAAAGCGAAAAGCCGGCTCAAAATAAAGAATAATATAGTATTCTCGAGGTGC
CCACATGCAATCTTTACTGCCCTACTATAACCTCCCTTGA
Chr coordinates
Chr VI from 147131-148459
