Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
LOC1 Systematic Name
YFR001W Strain
S288c Description
Nucleolar protein involved in the asymmetric localization of ASH1 mRNA; binds cooperatively with She2p to the E3 zip-code element in the 3'-UTR of the mRNA; constituent of 66S pre-ribosomal particles involved in pre-rRNA processing and nuclear export of the 60S subunit; may facilitate Rpl43p loading; required post-transcriptionally for efficient retrotransposition; absence results in decreased Ty1 Gag:GFP protein levels; relocalizes from nucleus to cytoplasm upon DNA replication stress External sources
Open in SGD
Open in KEGG
Gene Sequence
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>LOC1 YFR001W
ATGGCACCAAAGAAACCTTCTAAGAGACAAAATCTGAGAAGAGAAGTCGCACCAGAGGTG
TTTCAAGATTCACAAGCTAGGAATCAACTAGCGAATGTTCCTCATCTTACCGAAAAATCT
GCCCAGCGTAAGCCTTCTAAAACCAAGGTTAAAAAAGAACAGTCTTTGGCTAGACTTTAT
GGTGCGAAGAAGGACAAGAAGGGGAAATATTCTGAGAAAGACTTGAATATTCCAACACTC
AATAGAGCTATCGTTCCGGGTGTTAAAATAAGGAGGGGAAAGAAAGGTAAGAAATTCATT
GCTGATAACGACACTCTGACTTTAAACCGTTTAATAACAACTATTGGTGACAAGTACGAC
GATATAGCTGAGAGTAAGCTTGAAAAGGCTAGAAGATTAGAAGAGATACGAGAATTGAAA
AGAAAGGAAATTGAAAGAAAGGAAGCGCTTAAACAAGATAAACTAGAAGAAAAAAAAGAC
GAGATTAAAAAGAAGTCTTCTGTCGCAAGGACTATACGTAGAAAGAATAAACGTGATATG
TTGAAAAGTGAAGCAAAAGCTAGTGAAAGTAAAACTGAAGGAAGGAAGGTAAAAAAAGTC
TCATTTGCTCAATAG Promoter Sequence
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>LOC1 YFR001W
GGCCTGTTTACGAAATGGCAAATGATATACCATTATTGTTATATGATTGTAAATTTCCTG
AAATGGATTGGCAAGAACCTACTGTAGATGACTATAAGGCAATAAAATTCACGACAGCTA
CTGAAGCATTGACGTTACACTACGAACTTAAGGCCGCAGTATGCAATATTTTTAAAGATG
TTTTGCCCACAGCAAATACAAACAACTTCTCAAAGACAATTATTAATTTGGGCGATGGAA
GAGGTAAAGTAGTCGGTACCTATGTGAAACTAGAGGATAGAAGCGTTATGGAACCTGTCG
AAGTTGTTAATGCTAAATACTCCAAGAAAAAGAACAACAAAAATAAGTAAAATAATATAT
AAACCTGTATAATATAACCTTGAAGACTATATTTCTTTTCATCACGTGCTATAAAAATAA
TTATAATTTAAATTTTTTAATATAAATATATAAATTAAAAATAGAAAGTAAAAAAAGAAA
TTAAAGAAAAAATAGTTTTTGTTTTCCGAAGATGTAAAATAGGTTGAAAGTTAGAAATTA
GTATTATAATAGCAAAAAAAATTTAAAGTTAGAAATTAGAATTTAAGGCTCTACACACGT
TTACGATGATATTGGACGACCGACACGAAAAGACAGTTTTAGGCTTTCTTTTGTCTTGCT
CTTGCGTTGAAAGTACGTAATTTCCATTCGATTACTTACTCAACACTTGATATAGAGACC
AACTATAAAATAAACTGTTTGGGAAGGAAAGCAGAACTCTTGTAATTACCTCATCTCATT
ATCAAGAAGCAAAATTTTAACTATGTATTTTGACCTTATTTTTGTACTCCACTTTTTTTT
TTTAGTTTTTTTTAGTTATTTTTTAATTTTGAAGTAACGGCGATGAGGTGAAGTTTTTTT
TAAACTGAAAAAGAAGATCGAATGCAAACCATAAATTAGAGATCTAATTGAGGTAAAATT
ATAAGGTTAGATATCTGTAAATCTATACAATTAAGGAAAG
Chr coordinates
Chr VI from 149110-149724
