Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
HCA4
Systematic Name
YJL033W
Alias
DBP4, ECM24
Strain
S288c
Description
DEAD box RNA helicase; component of the SSU; interacts with Bfr2p and Enp2p; high-copy number suppression of a U14 snoRNA processing mutant suggests an involvement in 18S rRNA synthesis
External sources
Open in SGD
Open in KEGG
Gene Sequence
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>HCA4 YJL033W
ATGGCCAAAAAAAATAGATTGAACACAACTCAAAGAAAGACTTTACGTCAAAAGGAAGAT
GAGTACATCGAAAACTTGAAAACCAAAATTGATGAGTATGACCCTAAGATAACCAAGGCC
AAGTTTTTCAAAGATCTCCCCATTAGCGATCCCACATTAAAAGGTTTAAGAGAATCATCC
TTTATAAAACTTACTGAGATCCAAGCCGATTCTATTCCCGTGTCCCTGCAAGGTCATGAT
GTATTGGCGGCCGCAAAGACAGGTTCCGGTAAGACATTAGCATTTTTAGTTCCAGTAATT
GAAAAGCTATACCGCGAAAAATGGACCGAATTCGATGGGTTAGGTGCCCTTATCATATCT
CCAACAAGAGAGTTGGCTATGCAAATATATGAGGTTTTGACGAAAATAGGTAGTCACACT
TCATTTTCAGCTGGGTTAGTTATCGGTGGTAAAGATGTTAAATTCGAACTAGAAAGGATA
TCAAGGATTAACATTCTTATCGGTACACCTGGTCGTATTTTACAACATTTAGATCAAGCC
GTAGGTCTAAATACTTCCAATTTGCAGATGCTTGTTCTTGACGAAGCTGATAGATGTTTA
GACATGGGGTTTAAAAAAACTCTGGATGCCATCGTAAGCACATTGTCACCATCTAGACAA
ACACTTTTATTTTCAGCGACTCAATCACAATCTGTTGCAGACTTGGCTAGGCTTTCCTTG
ACAGATTATAAAACCGTTGGTACACATGATGTGATGGATGGGTCGGTTAACAAAGAAGCA
TCTACTCCAGAAACTTTGCAACAATTCTACATTGAAGTTCCTTTGGCAGATAAATTGGAT
ATCCTTTTCAGTTTTATAAAATCACATTTAAAATGCAAAATGATCGTTTTCTTATCAAGT
TCCAAACAAGTGCATTTTGTCTATGAGACATTTAGGAAGATGCAGCCTGGTATTTCTTTA
ATGCATTTACACGGTAGACAGAAACAACGTGCTAGGACAGAAACTTTGGACAAATTCAAT
CGTGCTCAACAGGTGTGTCTTTTTGCTACCGATGTCGTTGCTAGAGGTATTGACTTTCCT
GCAGTCGATTGGGTTGTTCAAGTGGATTGTCCAGAGGACGTTGATACATATATCCACAGA
GTCGGTAGATGTGCTCGTTACGGTAAAAAGGGTAAATCTTTAATCATGTTGACTCCACAA
GAGCAGGAAGCGTTCCTAAAAAGACTTAACGCTAGAAAGATCGAACCAGGCAAACTTAAT
ATAAAACAGTCAAAAAAGAAATCCATTAAACCACAATTGCAGTCATTATTATTCAAGGAT
CCAGAACTAAAATATCTAGGACAAAAGGCTTTTATATCGTACGTGAGATCTATATATGTG
CAAAAGGACAAACAAGTTTTCAAATTCGATGAGTTACCAACAGAAGAATTCGCTTATTCT
CTTGGTTTACCAGGGGCCCCAAAAATCAAAATGAAGGGTATGAAGACCATTGAGCAGGCC
AAAGAAAGAAAGAATGCTCCAAGACAGCTAGCTTTCTTATCAAAAGCAAATGAAGATGGT
GAAGTAATTGAAGATAAGTCGAAACAACCAAGAACAAAATATGATAAAATGTTTGAACGT
AAAAATCAAACCATCTTAAGTGAACACTATTTGAATATAACGAAGGCTCAAGCACAAGAA
GACGAGGATGACGATTTCATTTCTGTCAAGCGTAAAGATCATGAAATAAATGAAGCTGAG
TTACCAGCTCTAACTCTTCCAACTTCAAGGCGAGCACAGAAGAAAGCGCTTTCAAAGAAG
GCATCTCTGGCCTCCAAGGGTAACGCTAGCAAATTAATATTTGATGATGAAGGCGAAGCC
CATCCAGTTTATGAACTTGAAGATGAAGAAGAATTTCATAAGAGAGGTGATGCGGAGGTA
CAAAAGACAGAATTTTTAACTAAAGAATCTGCAGTAATGGCAGACATTGACAATATTGAT
AAGCAGGTGGCTAAAGAAAAAAAACAAGAGAAGAAGAGAAAAAGACTAGAAGCCATGAGA
AGGGAAATGGAGGCTGCTATGGAAGAAGAAATTTCTGGAGATGAAGAAGAAGGGAAGACA
GTAGCATATTTAGGAACAGGAAACTTGAGCGATGATATGAGCGACGGTGATATGCCTGAC
TCGGAAGGCCACTTGAAAAAGAAAGCTAGAACTGTTGACTATTCCCACGGCCACAATCCA
TCCAATTCAGTTGATGATGACATTATTGAAGTGGAAGAACCACAAACTTTGGAGGATTTG
GAATCTTTGACAGCTAAATTAATCCAGGGTTAA
Promoter Sequence
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>HCA4 YJL033W
TAACCGGCATTCCACCAGCACCAAGAGGTGTACCTCAAATTGAAGTCACATTTGCACTTG
ACGCTAATGGTATTCTGAAGGTGTCTGCCACAGATAAGGGAACTGGTAAATCCGAATCTA
TCACCATCACTAACGATAAAGGTAGATTAACCCAAGAAGAGATTGATAGAATGGTTGAAG
AGGCTGAAAAATTCGCTTCTGAAGACGCTTCTATCAAGGCCAAGGTTGAATCTAGAAACA
AATTAGAAAACTACGCTCACTCTTTGAAAAACCAAGTTAATGGTGACCTAGGTGAAAAAT
TGGAAGAAGAAGACAAGGAAACCTTATTAGATGCTGCTAACGATGTTTTAGAATGGTTAG
ATGATAACTTTGAAACCGCCATTGCTGAAGACTTTGATGAAAAGTTCGAATCTTTGTCCA
AGGTCGCTTATCCAATTACTTCTAAGTTGTACGGAGGTGCTGATGGTTCTGGTGCCGCTG
ATTATGACGACGAAGATGAAGATGACGATGGTGATTATTTCGAACACGACGAATTGTAGA
TAAAATAGTTAAAAATTTTTGCTGCTGGAAGCTTCAAGGTTGTTAATTTATTGACTTGCA
TAGAATATCTACATTTCTTCTAAAAATACATGCATAGCTAATTCAAACTTCGAGCTTCAT
ACAATTTTCGAGGAGATTATACTGAGTATATACGTAAATATATGCATTATATGTTATAAA
ATTAGAAAGATATAGAAATTTCATTGAAGAGTATAGAGACTGGGGTTAAGGTACTCAGTA
ACAGTGTCATCAATATGCTAATTTTGCGTATTACTTAGCTCTATTGCGCAAATGCAATTT
TTTCTTACCCTGATAATGCTTTATTTCCCGTTCCGAAAATTTTTCACTGAAAAAAAAGTG
CTTAAGCTCATCTCATCTCATCTCATCCCATCACTATTGAAATATTTTGCTAAAACATTA
TAACAGAGAGAGTTGAAAGGCTCGAGAACCTAATACTGAA
Chr coordinates
Chr X from 383837-386149