Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
NUP85
Systematic Name
YJR042W
Alias
RAT9
Strain
S288c
Description
Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport and NPC biogenesis and is involved in establishment of a normal nucleocytoplasmic concentration gradient of the GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at the nuclear periphery, including double-strand break repair, transcription and chromatin silencing; homologous to human NUP85 aka NUP75
External sources
Open in SGD
Open in KEGG
Gene Sequence
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>NUP85 YJR042W
ATGACAATCGATGATTCAAATCGATTACTTATGGACGTCGATCAATTTGATTTTTTGGAC
GACGGAACGGCGCAACTTAGTAATAACAAGACCGATGAAGAAGAACAACTATATAAAAGG
GACCCAGTCAGCGGGGCTATCCTGGTCCCTATGACTGTAAATGATCAACCGATTGAAAAA
AATGGCGACAAGATGCCTTTAAAGTTCAAGCTGGGGCCACTTTCTTACCAAAATATGGCA
TTCATAACTGCAAAAGATAAATATAAGCTTTATCCTGTTAGAATTCCTAGATTAGATACC
AGCAAAGAGTTTTCTGCATACGTATCAGGTTTATTTGAAATTTACCGTGATTTAGGTGAT
GACAGAGTGTTTAATGTACCAACGATTGGAGTTGTTAATTCTAATTTCGCGAAGGAGCAT
AATGCAACAGTAAATCTGGCCATGGAGGCGATTCTGAATGAATTGGAAGTGTTTATTGGT
AGAGTCAAGGATCAGGATGGAAGAGTGAACCGATTTTATGAGTTGGAAGAATCTTTAACC
GTTTTAAACTGTCTGAGGACAATGTACTTCATATTAGATGGTCAGGATGTAGAGGAGAAC
AGATCAGAGTTTATTGAGTCATTGCTAAACTGGATTAATAGATCAGACGGTGAACCAGAT
GAAGAATATATTGAACAAGTGTTTTCAGTGAAGGATTCTACAGCAGGTAAAAAAGTGTTC
GAAACACAATATTTCTGGAAGCTTTTGAATCAGCTTGTTTTAAGAGGCCTGCTCTCCCAA
GCTATAGGTTGCATTGAAAGATCAGATCTTTTACCATATTTGAGTGATACATGTGCCGTT
TCATTTGATGCAGTAAGTGACTCCATCGAACTCCTGAAACAATATCCAAAAGATTCGTCC
AGTACATTTAGAGAATGGAAAAATTTGGTGCTAAAATTAAGTCAAGCCTTTGGTAGTTCT
GCTACTGATATTTCCGGTGAATTACGGGATTACATTGAAGATTTCTTGTTAGTAATTGGT
GGAAATCAACGAAAAATTCTGCAGTATTCAAGGACGTGGTATGAGTCCTTTTGTGGGTTT
TTATTATACTATATCCCCTCATTAGAACTATCAGCAGAATATTTACAAATGTCACTGGAA
GCTAACGTCGTAGACATAACAAATGATTGGGAACAACCATGCGTCGACATCATTAGTGGT
AAGATACACTCAATTTTACCGGTAATGGAATCTTTAGATAGTTGCACAGCAGCATTTACC
GCTATGATTTGTGAAGCAAAAGGTTTGATAGAGAATATTTTTGAGGGTGAAAAAAATAGC
GATGATTATAGTAATGAAGACAACGAAATGCTTGAAGATCTATTCTCTTATAGGAATGGT
ATGGCATCTTATATGCTAAATAGCTTCGCTTTTGAGTTGTGTTCACTGGGTGATAAGGAA
CTATGGCCCGTTGCCATTGGATTGATAGCCTTATCTGCAACAGGGACGAGAAGTGCAAAG
AAAATGGTGATTGCAGAATTACTTCCACACTACCCATTTGTTACGAATGATGACATTGAA
TGGATGCTAAGTATATGTGTAGAATGGAGACTACCAGAAATAGCGAAGGAAATATACACC
ACGTTGGGTAATCAAATGTTATCGGCACACAACATAATTGAAAGTATCGCAAATTTTAGT
AGGGCGGGCAAATATGAACTGGTAAAGTCATATTCGTGGCTATTATTTGAAGCTTCGTGC
ATGGAGGGCCAGAAGTTGGACGACCCTGTGTTGAATGCCATTGTGAGCAAAAACTCTCCT
GCAGAGGATGACGTTATAATACCACAAGACATTTTAGATTGTGTAGTGACGAATTCTATG
CGTCAAACTTTAGCGCCATATGCTGTTCTGTCACAATTCTATGAGCTGAGGGACAGAGAA
GATTGGGGCCAAGCGCTGCGCCTATTGCTTTTGCTGATTGAATTCCCTTATTTACCAAAA
CATTACTTGGTTTTGCTTGTGGCGAAATTCCTGTACCCAATTTTCCTTTTAGATGATAAG
AAGCTAATGGATGAAGATTCAGTGGCGACAGTCATTGAAGTTATAGAAACTAAATGGGAT
GACGCTGATGAAAAAAGTTCAAACTTATATGAAACCATTATTGAAGCAGATAAAAGCTTA
CCTAGTAGCATGGCAACACTTTTGAAAAATTTAAGAAAGAAACTAAATTTCAAATTATGT
CAAGCGTTCATGTAA
Promoter Sequence
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>NUP85 YJR042W
TTAATTTCATGTAATCTATGCGTGGTTGTAAAAGGAACTTTCCCATAAAATGAGATAGAC
GAATGAAGGATTGGTTTGAAGATGCAGAATTTTTGGTCTGTGCGAAATATCTTAAACTTG
GTAGTAGCATATGCTTGCAGTAACAAGTAGCAATTTTGTTATCCGTTGTAGTAATATTGT
CAACATGAGTTAGATTGCAGGCATCTTGCAAGTATGAAAGCGCAAAGTCAGTCGTCGGGC
ACGAACTTAATCCATTTATGGCATGTTCTAAAAGTTGAAAAGACTCTTCAACAGAAAAAT
TGACAATCAAGTAGTCATTAATCGCAAAAAATGCTTTTATAAACGAAACGCTACGTGTAA
GTAATTTGTCTTTAGGCCAAAGGAAAAATGTTCTTATCATTACAGGCACAGTCTTCAATT
TTTTGAGTAGTTTTTTTATCGAAATTGGATCATTAATAGCATCTAATAATCTCGTGAAAA
TTATCCAAGTATGTTCACTGGTCTTAAAATCATCCAAATTTCCATTGTTGAGCCTATCAA
TGAGTAAATCTAAGACGAAAATTTCTTTTTTTGGAAAGTAGGTTTCTAATTTATCAAATT
TTGAAACTATCTCGGCAATTTGATGGGGTTTTGTGCTCGTCGAACGTAGTAATTTCGACA
AATCTTGGGCATTGTCTGGGATAGATAGTTCTTCTGTAAGATCACCCATATTATCAAAAA
GTGCAGTATACTCTCTGTTTTTCCAAAGATAATTGATGGCAAGCTAAATCTTAGACAGAG
ATGTTCCTATGCTAGTAAACAATTCTGTAGTTGTGACCAAGTGCCCTCTTAGCGATCATT
TTGAGATGAGCTAAGTGAAATTTTTCAGATCGCGCACGACGGAGAGGTTTTTTAGTTGGA
TGGAAGTCAAGCCTTGTACAAATTGTAGTTGTATAGAAAACATTGAACTTACGGTCTTGA
GTTGAGTCAATAAGCGTGAGCCAGAACGCAATTATCAGAT
Chr coordinates
Chr X from 514055-516289