Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
SKA1 Systematic Name
YKL023W Strain
S288c Description
SKI complex-associated protein; involved in 3'-5' degradation of long 3'UTR-containing mRNA, poorly translated mRNA, and other RNA regions devoid of ribosomes; proposed to assist the cytoplasmic exosome in a Ska1-SKI complex when a direct interaction between the ribosome and the SKI complex is absent External sources
Open in SGD
Open in KEGG
Gene Sequence
Download FASTA Hide Seq
>SKA1 YKL023W
ATGAATAAAGAAGAATTATTGGGTTTTCTACTAGATGACAGTATTGATAGCCAAAAAAGA
TGCGTCACGGATCAGCAGGCCTACTCTAATTGGTTAAAGAATGATAATGATGAACGTACG
GCCCATGAGGAAAGCTCTTCACAAAGTACGATAGCCGCATTGAATAAGAAGAAGCAGACA
GAAGCTGCTCAAGAAGATATAGAAGAACTGTTAAACGGCTTAGAAGGCATTATTGGAGGA
GCCGACCCCCGTAATCTCAAGAGTAAGTCAAAGAGGAAAACCAAAAAGGGCGGATCGAAA
CCAAGGGAAGAAAACGTGAATACGGAGAAACATATTGTAATGCTCGAGGTAGAAGATTTT
AGTGATATGAGCACCCACGAAGATGTCAACGGAGCAAGTCCGTCGCCAAATCTGGACCGG
TCGAAGAAGAATGAGAAGCGAAGGAAAAACGCCAAGGAGCTGTCATACGATGAACTAAAA
GACAAACTAGAAGTTACCACTCGCAAATCACGTCTTGAGTGCAAAGACTTGAAAAAGAAA
GTTCATGGGCTCGAAAGAAGGAACCTTGAACTTGAACAGCGTTTAGAAGAGCTGAAGATT
GAGAACCAGACTTTGATAGAGATTAACAATAAACTGTTGAAAAACACTAATGAGGATGAG
ATTAACAAGAGCCAGAGGAACAAGGAGAAGGACCGAAAGCGGAGGGAAAGAAGAACGGCA
AGGAGAAAAGATGAAAGAAAGCAGGAAAAAAAGCAGGAAAAAAAGCAGGATAATAAAACA
TCTCAATCTTTTCCTTCCTCAACTGACATGAATGGACAGCCTATAGAATTTTGA Promoter Sequence
Download FASTA
>SKA1 YKL023W
CAATAGTCTCTCTAACATGATATCTTCAGGGCAGTCAAAGAACAGGATGAATTTGCTTTC
AACGATGTCTCTTTCAAAGGAAATGGCTTGATCCATCTTCCTAGGAAATCCGTCAATTAA
GAACTTATGCTTGTTCGCCTTGACGTTATCGGAAATAGCGTTGCGTAAAAGCGCCAAAGT
AATCTCTTGAGGGACAATCTGGCCCTCTTTGATGCAGTTCTTGATCAATTCCCCATATTG
GGAACCTGCTCTGCCCTGCTCAGCACGTAGAAGGTCTCCGGCTGACAAATGGACAAATGA
ATAGTCCTTAACTAGTTTTTCACACTGAGTACCCTTGCCTGCACCGGGTCCTCCTAGAAC
GAAGATCACGGAAACTTGGTCAGGCGAGAAAGCTGGCTGTGATGTAGTGGCAGCTGTCAT
TTGTCTTATTCAAGAAATTCAACTGGTTCGTTCTTTTGATAGTTTACCGAAATAACTGAT
GTCACGAGTGCTAAAGTTCCTACGAGTACCAACAATTTGCCTTTGTGTTTACCCTTGCTT
TGACTTTTGTTAGCGCGTGGTACGTTTACGTTGGTCTTCGAAGGTGCTGTATTGTGGAAA
GTTGGTTTTTTCGAAGAATAAAATCTCAGTATAAACCTGTAGCGTGGATTCATAATATAA
CTAAGCTAACATAAAAACGGGAGAGGGTGTGTGCGACTAAAGGCAAAGACAGGAATGCAT
CGCTTTAAAAGATCACCATAACTACTTAAAAGTTTCGTTAACGTGGTGAAAAAGAAAAGA
AAAAGAAAAGTGAAAAAAATAAACCTAGGGTTGAAAATATAATCAGTTAGGTGTCATGAT
ATTGATACATTTATTTCTATAGGTCTGAGAGTACTAACTTAGGGTATATGAGGGGTGTTA
AGTTGGGATGATGACGCATTAATTAAGAGTTCATTATATGAGGATATTGTATACAATGCA
AGAATAGCGCCCCAATCCCGGCCAGGTATAACGTGCAAGC
Chr coordinates
Chr XI from 393721-394554
