Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
DEF1 Systematic Name
YKL054C Alias
VID31 Strain
S288c Description
RNAPII degradation factor; forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII present in an elongation complex; interacts with general transcription factor TFIIH; mutant is deficient in Zip1p loading onto chromosomes during meiosis External sources
Open in SGD
Open in KEGG
Gene Sequence
Download FASTA Hide Seq
>DEF1 YKL054C
ATGTCTACACAATTTAGGAAGTCTAATCATAATAGTCATAGTAGTAAAAAACTAAATCCT
GCGCTAAAGTCCAAAATAGATACGCTTACAGAATTGTTCCCTGACTGGACGAGTGATGAT
TTAATTGATATAGTTCAAGAATATGATGATTTGGAAACTATAATTGATAAAATTACTTCC
GGCGCAGTGACAAGATGGGATGAAGTAAAGAAACCTGCTAAGAAGGAAAAATATGAAAAA
AAGGAGCAACAACACTCATATGTCCCTCAACAACATTTGCCAAATCCAGAAGATGATATT
ACATATAAGAGTTCTAATAATAGCAATTCTTTTACTTCTACAAAGCATAACAGTAGTAAC
AATTATACTCAAGCCAGAAATAAGAAGAAGGTACAAACACCACGAGCTCATACAACCGGG
AAACATGTTAATCTCGACAAGGGGAAGCACGTACCATCCAAGCCTGTTTCAAACACTACA
TCGTGGGCAGCAGCTGTTTCTGTAGATACTAAACATGACGTTCCTCAAGATTCAAATGAT
AACAATAATGAAGAATTAGAAGCACAAGGGCAACAAGCGCAGGAGAAAAATCAAGAAAAA
GAGCAAGAAGAGCAACAACAGCAGGAAGGGCATAATAACAAAGAAGAACACAAACAAATA
GAGCAACCTTCTTTATCTTCAAAGAAAACAACTTCTAGGACATCTGCTTCACAACCAAAG
AAAATGTCGTGGGCTGCAATTGCTACACCAAAGCCAAAGGCTGTTAAAAAGACCGAGTCT
CCTCTTGAAAACGTTGCTGAATTGAAGAAAGAAATAAGCGATATTAAGAAGGATGACCAA
AAGTCTGAAGCTAGTGAAGAAAAAGTTAATGAACAAGAAACATCTGCACAAGAACAAGAG
GAGGAGACTGCTGAACCTTCTGAAGAAAATGAAGACAGAGTCCCTGAAGTGGACGGAGAA
GAAGTCCAAGAAGAAGCTGAAAAAAAGGAACAAGTAAAAGAAGAGGAACAGACAGCGGAA
GAGCTGGAACAAGAACAAGATAATGTTGCTGCTCCAGAAGAAGAAGTTACAGTTGTTGAA
GAAAAGGTTGAAATTAGTGCTGTTATTTCAGAGCCTCCAGAAGATCAAGCTAATACTGTA
CCTCAACCACAACAACAATCCCAACAACCACAGCAACCACAGCAACCACAGCAACCACAG
CAACCACAGCAACCACAGCAACAACAACAACCACAGCAACCACAACAACCACAACAACAA
CTACAACAGCAACAGCAACAGCAACAACAACCAGTACAAGCTCAAGCTCAAGCCCAAGAA
GAACAATTATCTCAAAACTACTATACTCAACAACAGCAGCAACAATACGCTCAACAACAG
CATCAGTTACAGCAACAGTATTTGTCCCAACAACAACAATATGCTCAGCAACAGCAACAG
CATCCACAACCTCAATCACAACAACCTCAATCACAGCAAAGTCCACAAAGTCAAAAACAA
GGGAACAACGTGGCTGCCCAACAGTACTACATGTATCAAAACCAATTTCCTGGATATTCT
TATCCAGGTATGTTTGATTCACAAGGATACGCTTACGGTCAACAATATCAGCAACTTGCT
CAAAACAACGCTCAAACTAGTGGTAATGCTAACCAATATAATTTCCAACAAGGTTATGGT
CAAGCAGGCGCGAACACTGCTGCTGCTAATTTGACTAGTGCTGCCGCTGCTGCTGCCGCT
TCTCCAGCTACAGCTCACGCCCAACCTCAACAACAACAGCCATACGGTGGCTCATTCATG
CCATACTACGCCCACTTTTACCAACAGTCATTCCCATATGGTCAACCTCAATACGGTGTA
GCTGGTCAATATCCATACCAGTTACCAAAGAACAATTACAACTATTACCAAACTCAAAAC
GGTCAGGAACAGCAAAGTCCAAATCAAGGTGTTGCCCAGCATTCTGAAGACTCTCAACAG
AAGCAATCACAACAGCAACAGCAACAGCAACCTCAAGGTCAACCCCAACCTGAAGTTCAA
ATGCAAAATGGCCAACCTGTTAACCCACAACAACAAATGCAGTTCCAACAATACTATCAA
TTCCAACAACAACAGCAACAAGCTGCTGCCGCTGCCGCTGCTGCTGCCCAACAAGGTGTA
CCATATGGCTACAACGGTTATGATTACAATTCTAAAAATTCAAGAGGTTTCTACTAA Promoter Sequence
Download FASTA
>DEF1 YKL054C
ATAACAACGAAGGGCCCGATGAAGAAGAGAGTACGAAAGAAGTACCAAAGCCTGGGACCA
TCATTCATTTTTCTACGAATAGATAGAATAAATAAGTACATACAATTTTTACTAGTGATG
AATATCAGAACGCAGGGTAATGGGCCCGCTATATTTTTTCTTCGATATAGGGAGAGCCAC
ATTCAGAATATTCAGAGTATTTGCATGTAGAAATTTATTCTAAGTGCGCCAGATATATGC
CGGGAGAGGTCATTAGAAAACATCTGTTTGTGTTTTAACTTGAATTACAATAACAATAAT
ACCAGTTTTATATGGGGAATATAATGTCAGCTAGTTTTGCGCCTGAATGCACTGACCTGA
AGACGAAATACGATAGTTGTTTTAATGAATGGTATAGCGAAAAATTCCTGAAGGGAAAAT
CCGTTGAGAACGAGTGCTCAAAACAATGGTACGCTTATACTACATGTGTCAACGCAGCTC
TCGTCAAACAAGGTATTAAGCCTGCTCTAGACGAAGCTAGGGAGGAGGCGCCGTTTGAAA
ATGGCGGCAAACTAAAAGAAGTTGACAAATGAAGTATATATTTTAGCACAGAATGTGCAT
TATTCAACATGTAAATACTAATACTGCAATATCGACTTATAATAATGTATAGTGATCCGT
ATATTAATAGATCTGTTTCAATTCTTTACCTTTTTAGGATATCCGTCACCCGTGATTCCG
TCGGAGGTGAGCACTCGCCCAAATAAATAACGGGAAATGGTGGCAAAAAGTAGTGGCGGG
AAAAGGAAAAATTTTCGTTCTCTCCCATATAAACGTTTCATTCCTTTTCCTAAGTCTTTT
ACAGTAATTTCAGAAACATTCGTATTTTATATTTGATCTTTTGAAGCTACAAGAAAAACT
CTTACCAATTACCCCAAAAAAATCACCATCATAAAGTACTTACATATTTATTTTTGTTTG
GTCGTTTTCTCAATATAATCTACATCATCATATATATATA
Chr coordinates
Chr XI from 338753-336537
