Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
MSL5 Systematic Name
YLR116W Alias
BBP Strain
S288c Description
Component of commitment complex; which defines first step in splicing pathway; essential protein that interacts with Mud2p and Prp40p, forming a bridge between the intron ends; also involved in nuclear retention of pre-mRNA; relocalizes to the cytosol in response to hypoxia External sources
Open in SGD
Open in KEGG
Gene Sequence
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>MSL5 YLR116W
ATGAGTTTTAGAAGGATTAACTCTAGATACTTTGAAAATAGAAAAGGAAGCAGTATGGAA
GAAAAAAAAGCAAAGGTTCCTCCAAACGTCAACCTTTCGTTATGGAGAAAGAACACGGTA
GAAAGCGATGTCCATCGATTCAATTCTCTTCCATCAAAAATTAGTGGGGCCCTAACTAGG
GAACAAATATACTCCTATCAAGTCATGTTTAGGATTCAAGAAATTACCATCAAACTGCGT
ACGAACGATTTTGTGCCCCCCTCCAGGAAAAATAGGTCACCTTCTCCGCCACCAGTTTAT
GATGCCCAAGGTAAAAGAACGAATACCCGTGAGCAGAGGTATAGAAAGAAACTAGAGGAT
GAACGTATTAAACTTGTTGAGATAGCCCTAAAGACCATCCCTTACTTCGTTCCTCCGGAT
GATTACAAGAGACCTACCAAATTTCAGGACAAGTATTATATCCCGGTGGATCAGTATCCT
GATGTCAATTTTGTTGGTTTATTATTAGGTCCTCGTGGACGTACGTTAAGAAAGCTGCAA
GAAGATTCGAATTGTAAGATTGCAATTAGAGGAAGAGGTTCAGTCAAAGAAGGTAAGAAT
GCAAGTGACTTACCTCCAGGCGCCATGAACTTTGAGGACCCCTTGCACTGTTTAATTATC
GCAGACTCGGAAGACAAGATCCAAAAAGGTATAAAAGTTTGTCAAAACATTGTTATCAAA
GCGGTGACATCTCCGGAAGGCCAGAATGACTTGAAACGAGGACAACTGAGAGAATTGGCG
GAACTTAATGGTACTTTAAGAGAAGATAACAGGCCCTGTCCAATCTGTGGTTTAAAAGAT
CATAAAAGGTACGATTGTCCAAACAGAAAAATCCCAAATATACAGGGCATTGTTTGCAAA
ATATGTGGACAAACTGGACATTTCAGTAGAGACTGTAACTCATCGTCTCAAAGAATGAGC
CGTTTTGACAGAAACGCCACGGTAAATAATTCTGCGCCAATACAGAGCAATGACGTACAC
TATAATAGCAATACTCATCCAATTCAAGCACCAAAAAGATCTCGTTATGACAATAACTCG
ACGGAACCTCCTTTAAAATTTCCGGCTTCTTCACGTTATGCACCATCACCTTCACCTCCT
GCGTCACATATTTCGAGGCAAGCTCAAAACGTGACGCCTACACCCCCTCCCGGCCTAACA
TCAAGTAGCTTTAGTTCCGGAGTTCCAGGAATCGCCCCTCCCCCATTACAAAGCCCTCCA
GAGTCGGAACAACCGAAATTTTCGCTACCTCCACCTCCCGGTATGACTACGGTACAATCC
TCAATTGCACCTCCTCCTGGCCTAAGCGGTCCTCCAGGGTTTTCTAATAACATGGGCAAT
GACATTAACAAACCTACACCTCCGGGACTGCAAGGGCCTCCCGGATTATAA Promoter Sequence
Download FASTA
>MSL5 YLR116W
CTCGTTACTCGGGATTTTCTGGAACCGGAGAAGCAGAAAATTTTGATAACCTTGACTATT
TAAAGATAGACAAAACGCTCTCCAAAAGAACAATCTCAACTGTAAATGTCCAATTGAAAT
GCTCCGTAGTAATCCTAAATTTACAGAGTTTAGTTGATCAAAGGTCTGCATCTATTATAT
GGCCATCGCTAAAATCTAGAAAAATAGTTCTTTCCGCCCCCAAACAGATTCAAAATGAAG
AAATTACGGCAAAACTTATCAAGAAAAATATTGAAGTGGTCAACATGCCATTAAATAAGA
TAGTGGAATTCAGTACAACAATAAAGACCCTGGATATCTCCATTGACTCCAACCTCGATA
ACCTTTTGAAATGGCAACGTATCAGTGATAGTTATACAGTTGCCACTGTCGTTGGCAGGC
TGGTTAAGGAGAGCCTACCGCAAGTGAACAATCATCAAAAAACAGCGTCAAGGAGTAAAC
TAGTCTTGAAACCATTACACGGTTCATCTAGGAGCCATAAAACAGGTGCGTTGTCAATCG
GTGACGTTAGGTTAGCACAATTAAAGAAACTTCTCACAGAGAAAAACTACATTGCAGAAT
TTAAAGGGGAAGGTACACTTGTCATAAATGAAAAAGTAGCAGTCCGCAAAATCAATGATG
CAGAAACTATTATCGATGGTACGCCTTCCGAACTTTTTGATACTGTCAAAAAATTGGTTA
CGGATATGTTAGCAAAAATCTAGCCTTCTTGTATACAGCACAAATAAAAGGTTCAATTTA
CGTTCGTGGACTGCCCACAAAACAGTATGTGACATAAATTGCTGTGTATCTCGCACCGCT
ATTATCTGTATATAACATTCTAACTCACTTTTAACGATATTAGCATTATTGATTTCTTTC
TTTTTCTGCTGAATTTCACCAAGCGGAAATTTTCAAAGCAGAATTTTTTCCCTAATTTGC
TACAAGTGCTATTCTATCCCACAATAAAAGGAAATTGTTG
Chr coordinates
Chr XII from 380822-382252
