S.cerevisiae - Yeastract

Locus Information

Standard Name	HCR1
Systematic Name	YLR192C
Strain	S288c
Description	eIF3j component of translation initiation factor 3 (eIF3); dual function protein involved in translation initiation as a substoichiometric component (eIF3j) of eIF3; required for 20S pre-rRNA processing; required at post-transcriptional step for efficient retrotransposition; absence decreases Ty1 Gag:GFP protein levels; binds eIF3 subunits Rpg1p, Prt1p and 18S rRNA; eIF3 also involved in programmed stop codon read through; human homolog EIF3J can complement yeast hcr1 mutant
External sources	Open in SGD Open in KEGG

Gene Sequence Download FASTA View Seq	Sequence hidden
Promoter Sequence Download FASTA	>HCR1 YLR192C AATAAGTATTGTCTGGCTTCTGAGACGGCGGTAAGATATCCTTAAGAGTTGCAATGGTCC TTTTACACAAAAGCACACATATATTTCCTACCGATTTTGCCTCTGTTTCACGCGCCTTTT TTAATAGATACCCCAATCCATACTCCCCCCATGTACTATCCATAGACACAATATCAAGGA ACGTTGATCAAGAAGGAAATTTGCGCACAACGAGGCTGTTGAAAAAGTCCGGAAAGCTGC CCACATGGGTCAAACCCTTTTTAAGAGGTATAACAGAAACATGGATAATCGAAGTTTCCG TAGTGAACCCCGCTAACTCCACAATGAAAACTTACACTAGGAATCTGGATCACACTGGAA TCATGAAGGTTGAAGAATATACTACCTATCAATTTGACAGTGCTACAAGTAGTACGATAG CAGACAGCCGGGTGAAGTTTTCAAGTGGCTTCAATATGGGTATCAAATCTAAGGTAGAGG ATTGGTCGCGCACTAAATTTGACGAAAACGTTAAGAAAAGCAGAATGGGCATGGCATTTG TTATCCAAAAACTCGAAGAGGCGAGAAATCCTCAGTTTTGATGTTCCCATTTAAAGATCT TTAAAGATATCACCATGGGCGAGCGAAATTGAGAAAACTAGTGCAGCTCGCATTTGGTCA CGTCCTAAAAATTGTAAATAAGCGCTGGTTCAACAAAATTTAATATACACACATATATAA TTATTTATTTATAACAGTCATTCTGCTAAACTATACATCAAATGTCACTAATCTTGATAT TATGGTCGTCCCTGTATCATATTAGACGAACACACCTGTTTTTGGGCATTTTCCGAATTT TTTTTTCATGCTAGCTAAGTCAGAAGTACTACATTAAAGAATTGAGAACTGACTGCTCCC ACCATTCTTGAACTCTCGCTTTAAATTATCTTACTATCTTTTGAGTTCCTTGTAACTATT CTATCCTAACCACCACCTCAAAAAAAAAAAAGTAATAAAA
Chr coordinates	Chr XII from 539589-538792