Yeastract
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YEASTRACT+ INESC-ID IST IBB
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Locus Information

Standard Name HCR1
Systematic Name YLR192C
Strain S288c
Description eIF3j component of translation initiation factor 3 (eIF3); dual function protein involved in translation initiation as a substoichiometric component (eIF3j) of eIF3; required for 20S pre-rRNA processing; required at post-transcriptional step for efficient retrotransposition; absence decreases Ty1 Gag:GFP protein levels; binds eIF3 subunits Rpg1p, Prt1p and 18S rRNA; eIF3 also involved in programmed stop codon read through; human homolog EIF3J can complement yeast hcr1 mutant
External sources Open in SGD external link
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Gene Sequence
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Promoter Sequence
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>HCR1 YLR192C
AATAAGTATTGTCTGGCTTCTGAGACGGCGGTAAGATATCCTTAAGAGTTGCAATGGTCC
TTTTACACAAAAGCACACATATATTTCCTACCGATTTTGCCTCTGTTTCACGCGCCTTTT
TTAATAGATACCCCAATCCATACTCCCCCCATGTACTATCCATAGACACAATATCAAGGA
ACGTTGATCAAGAAGGAAATTTGCGCACAACGAGGCTGTTGAAAAAGTCCGGAAAGCTGC
CCACATGGGTCAAACCCTTTTTAAGAGGTATAACAGAAACATGGATAATCGAAGTTTCCG
TAGTGAACCCCGCTAACTCCACAATGAAAACTTACACTAGGAATCTGGATCACACTGGAA
TCATGAAGGTTGAAGAATATACTACCTATCAATTTGACAGTGCTACAAGTAGTACGATAG
CAGACAGCCGGGTGAAGTTTTCAAGTGGCTTCAATATGGGTATCAAATCTAAGGTAGAGG
ATTGGTCGCGCACTAAATTTGACGAAAACGTTAAGAAAAGCAGAATGGGCATGGCATTTG
TTATCCAAAAACTCGAAGAGGCGAGAAATCCTCAGTTTTGATGTTCCCATTTAAAGATCT
TTAAAGATATCACCATGGGCGAGCGAAATTGAGAAAACTAGTGCAGCTCGCATTTGGTCA
CGTCCTAAAAATTGTAAATAAGCGCTGGTTCAACAAAATTTAATATACACACATATATAA
TTATTTATTTATAACAGTCATTCTGCTAAACTATACATCAAATGTCACTAATCTTGATAT
TATGGTCGTCCCTGTATCATATTAGACGAACACACCTGTTTTTGGGCATTTTCCGAATTT
TTTTTTCATGCTAGCTAAGTCAGAAGTACTACATTAAAGAATTGAGAACTGACTGCTCCC
ACCATTCTTGAACTCTCGCTTTAAATTATCTTACTATCTTTTGAGTTCCTTGTAACTATT
CTATCCTAACCACCACCTCAAAAAAAAAAAAGTAATAAAA
Chr coordinates Chr XII from 539589-538792
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