Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
NRD1
Systematic Name
YNL251C
Strain
S288c
Description
RNA-binding subunit of Nrd1 complex; complex interacts with exosome to mediate 3'-end formation of some mRNAs, snRNAs, snoRNAs, and CUTs; interacts with CTD of RNA pol II large subunit Rpo21p at phosphorylated Ser5 to direct transcription termination of non-polyadenylated transcripts; H3K4 trimethylation of transcribed regions by Set1p enhances recruitment of Nrd1p to those sites; role in regulation of mitochondrial abundance and cell size
External sources
Open in SGD
Open in KEGG
Gene Sequence
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>NRD1 YNL251C
ATGCAGCAGGACGACGATTTTCAAAATTTTGTAGCTACCTTGGAATCATTCAAAGATTTG
AAATCTGGTATTTCAGGTTCTCGTATTAAGAAACTAACCACTTACGCACTTGATCACATT
GATATTGAATCGAAAATCATATCTTTGATAATAGACTACTCAAGACTTTGTCCCGATTCT
CATAAATTAGGTTCTTTATATATCATCGATTCAATAGGTAGAGCTTACTTGGATGAAACA
AGATCAAATTCAAACAGCAGCAGCAACAAACCCGGTACTTGTGCCCATGCCATAAACACG
TTGGGCGAAGTAATTCAAGAACTGCTATCCGATGCTATTGCAAAAAGTAATCAAGACCAC
AAGGAAAAAATTCGTATGCTTTTAGACATTTGGGACAGGTCCGGCTTGTTTCAAAAGAGT
TACTTGAACGCCATCAGGTCAAAATGCTTTGCTATGGACATATCGAATAACACCGCGAAC
ACCGCTTCACAACAACTATCACTGGATCCCAAGCAGAGGTCGAAACAAATCTTGTCAAAT
CTAAAGAAAAGTCCTCCTTTAAACTTGAACATAAGTCTTCCAACTGATTTGACTTCCACA
GATCCAGCCAAACAGCAAGCAGCTCTTTTCCAAGTAATAGCGGCTCTGCAGAAACATTTT
AAAACTTTGCCTTCACATACATCCGTGGGTACAGTCGCACCTCCCCAAGCCCATACAATT
ACCGAATATGGTAGCAGACGTGAACGTGAACGTGAAAGAGAAAGATATAACTCAAGAAGG
AATAGATCAAGATCTCCTCCGGCACCATTTTCTCAGCCATCGACAGGCAGGAAGGACCGC
TATCCATCTGTGGCCCAGGACCAATACAGCATAGGCGCCCCCAATACGACATTTGGCACA
AACAATCACCACTTATACCCCGATGAGCTTAATGTTTCCAATAATCCTCATTATAGACCA
AAACCAGTAAGTTACGACTCTACATTGCCACCAGATCATATTAAAGTCTACAGCCGTACT
CTTTTCATCGGTGGGGTACCACTAAACATGAAGGAATGGGACCTTGCTAACGTTTTAAAA
CCTTTTGCTGAAGTACAAAGCGTCATTCTGAATAACTCCAGAAAACACGCTTTTGTGAAA
GTTTATTCAAGACATGAGGCCGAAAATGTTTTGCAAAACTTCAATAAAGATGGAGCCCTG
CCATTGAGAACTAGGTGGGGAGTTGGTTTTGGTCCAAGAGATTGTTGTGACTATCAACAC
GGTTACAGTATTATTCCTATGCACAGGCTCACGGACGCTGATAAAAAATGGTCAGTAAGT
GCGCAATGGGGTGGCACTTCTGGTCAACCTCTCGTTACCGGTATTGTTTTCGAAGAACCG
GATATTATCGTTGGTGAAGGTGTTTCTTCCAAGGCAATATCTCAAAAGATGCCTACTGAT
TCTGGCAGAAATGGGCCACGTTCTGGTAAACCTAACAAATCTGGTAGCATATCGTCGATA
TCTCCAGTACCCTACGGCAATGCACCATTGGCATCTCCTCCACCACAGCAATATGTGCAA
CCTATGATGCAGCAACCGTATGGTTATGCCCCCAACCAACCATTACCTTCTCAGGGACCT
GCCGCAGCGGCTCCCCCTGTACCTCAGCAACAATTTGACCCCACTGCTCAATTGAATTCT
TTGATGAATATGCTTAACCAACAGCAGCAGCAACAACAACAAAGCTAA
Promoter Sequence
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>NRD1 YNL251C
CCGCTTTAGAAGCGATGAGGCAAGAACAAAGGCAACAAACAGGGACAAGATGAAAACCGG
AACCTTATCTCAGATGAAGACAAACGAGGTGAAGGCATTTTTTTTTTTTGACTAAGTTAG
ATTAATATTTGCATTGTCATATGGGTGGGTTCTACTGCAGTTACTAGCGCACGAGACAAG
GCAAAGCCGTGAAAGTATTGCAAGATGCATGGTTATTATTCTCCGAAAATAATAAGTGAA
GGATTGTAACATTACCGCAAGTATTAGTATTGTAAGTGGAAGTACTATCGGTTTCTTGTT
TCAATGAATAGCACCAGAAACGCAAAAAATCTACAATTAGTTTATGGTCGAAATGAGCTA
CTGCGCACGTATAGCGCATTGTTTCCTATTCTACTAAAGTCCGCAATACATAATTCTATC
GAGTACTCAAAAACATTATGCTTTTGATGGCTTGTTAGATATCCTTATGACCACTAACCT
GAAATTGAGCAAATTCATTGGAAAGTCGGCGGCAAAAATAAATGTTTCGTCTTTGGTGAT
TTATTGGTCATTACATACGGTACATTTTTGATTTTTTTTTTTGCCACCGGTCGGAGCGGA
GGAGGTGAAAAAGAAAAAGTATAAAAGGGCAAGTGTTTCGTCCTTCCTCCATGTTCCATT
CCTCGTTAGCATGACTCCCCGCTCCTTCCCTTTACGAGTTTCATGCTTTTAACATATCAA
AAGTCAGTACTCGGCAACCTTATTGTATCGTTTTCGTATCGTATCGCATCGTATTATCGT
ATTGTACACAACTAACTCACCAATCAAGGCTCTTCTTACAATTAGTTACGTTACCGTATC
CATTGCTACAACCTATAATTTCAAGCAAAAGAAAAATATACTATTGTCTATTTTTTTGTA
TTGTAGTTTTCTCTGATTACACATTTTTTCTAGTACTTTTCTCCAAGCACGAGTTACAGG
AAAGGAACCGGAAAGCAACAAACATACTAAACATCCCATA
Chr coordinates
Chr XIV from 174315-172588