Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
TRF5 Systematic Name
YNL299W Strain
S288c Description
Non-canonical poly(A) polymerase; involved in nuclear RNA degradation as a component of the TRAMP complex; catalyzes polyadenylation of hypomodified tRNAs, and snoRNA and rRNA precursors; overlapping but non-redundant functions with Pap2p External sources
Open in SGD
Open in KEGG
Gene Sequence
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>TRF5 YNL299W
ATGACAAGGCTCAAAGCAAAATATTCACCTACAAAAGGTAAAAGAAAAGAAGATAAACAT
ACAAAACGTATGCGTAAATCATCCTTCACAAGAACGCAAAAAATGCTTGAAGTATTTAAC
GATAATCGCTCGCATTTTAACAAGTACGAGAGCCTCGCTATCGACGTTGAAGACGATGAC
ACTTTCGGAAACCTAGTCTTAATGGAAAATGATAAAAGTGATGTCGACATACCTGTAATA
GAAGAAGTCACATCAAGTGAAGATGAACAAAGGGCAGAATCTAGCAAAAGAAACAATTCT
CTCGAAGATAATCAAGATTTTATTGCTTTTTCGGACAGCTCTGAAGATGAAACAGAACAA
ATAAAGGAAGATGATGATGAAAGAAGCAGTTTTCTGTTGACCGATGAACATGAAGTTTCT
AAGCTTACTTCACAGCAATCTCTGAACACTGAAAGCGCTTGCAATGTGGAGTATCCTTGG
ATAAGAAATCATTGTCATTCGAAACAAAGGAGAATAGCAGATTGGCTAACTTCAGAAATC
AAAGATTTCGTTCATTATATCTCTCCAAGCAAGAACGAAATCAAGTGCAGAAATAGAACG
ATCGATAAACTACGCCGGGCGGTCAAGGAACTGTGGTCGGATGCAGATTTGCATGTGTTT
GGTTCTTTTGCCACCGATTTATATTTGCCGGGTTCTGACATTGACTGTGTCGTAAACAGC
CGGAATCGCGATAAAGAGGACAGAAATTACATTTATGAATTGGCGAGACATTTGAAAAAC
AAAGGGCTAGCTATAAGAATGGAGGTTATTGTTAAAACGCGAGTGCCTATTATCAAATTC
ATAGAGCCCCAATCACAGTTACATATCGACGTTTCATTTGAAAGAACGAACGGGTTAGAG
GCTGCAAAACTCATCAGGGAATGGCTAAGAGACTCTCCAGGGTTACGTGAACTGGTACTG
ATAATAAAACAATTTTTGCATTCAAGACGATTGAACAATGTGCACACAGGAGGATTGGGA
GGTTTCACAGTAATCTGTTTGGTTTATTCTTTTTTAAATATGCATCCGCGAATAAAATCA
AACGATATCGACGTTCTAGATAACCTGGGTGTTCTACTGATTGACTTCTTCGAACTTTAC
GGAAAAAATTTTGGTTATGATGACGTTGCTATAAGCATATCTGATGGTTACGCCTCTTAT
ATTCCTAAATCGTGTTGGAGAACTTTGGAACCTTCAAGGAGTAAATTCTCGCTAGCTATT
CAAGATCCTGGTGATCCTAACAATAATATAAGCAGAGGCTCCTTTAATATGAAGGATATA
AAAAAGGCCTTTGCTGGTGCCTTCGAACTGTTGGTCAATAAATGCTGGGAATTGAATTCT
GCTACATTCAAAGACCGCGTTGGAAAAAGTATACTCGGAAACGTGATCAAATACCGTGGG
CAAAAGAGAGATTTCAACGACGAAAGAGATTTAGTGCAGAATAAAGCCATCATTGAAAAC
GAGCGCTACCACAAGAGGCGCACGAGGATAGTTCAAGAAGATTTATTTATAAACGACACC
GAAGACTTGCCAGTAGAGGAGATCTACAAACTTGACGAACCTGCAAAGAAGAAACAGAAG
GCAAAAAAGGATAAGAGAGAAGGGGAAATCAAAAAGAGTGCCATTCCATCTCCACCTCCG
GATTTTGGAGTGAGCAGAAGCAAATTGAAACGCAAAGTGAAAAAAACTGATCAGGGCTCT
CTCCTACACCAAAACAACCTCAGCATAGATGACTTGATGGGACTTTCTGAGAATGATCAA
GAATCCGATCAAGATCAAAAAGGAAGAGATACCCCTTCGGGACAAGATGAGAAATCACCA
CTGGAAACTAAGACAGTAGATGCTCAAACGAGAAGGGACTACTGGCTCTCTAAAGGCCAG
GCTCTTTAA Promoter Sequence
Download FASTA
>TRF5 YNL299W
GTGATTCTCGAGGAAAATAAAATTCGTGATAAATACATGCATGTGTATATATAAGGCGCT
ATATATGGCCTTGAAACTTTGTTATTACGCCTACTCCATCTTTATTGGTACATATATCAT
TTAAAAGAGTAGTCCATAGAAAACCAACTGCATTCCTTCCTTATCCCTGCCTTCGGCTAA
TTTTAAACCAACTTTTTACCTTCCTTTAATATCAATATCAAAATACAATGAAATTCTCTA
CTCTCTCCACCGTTGCTGCCATTGCCGCATTTGCTTCCGCAGATTCCACCTCTGATGGTG
TCACTTACGTAGATGTTACCACCACCCCACAAAGTACTACATCTATGGTCTCCACCGTGA
AAACTACTTCCACTCCATACACTACAAGTACCATTGCCACTCTATCCACTAAATCTATCA
GTAGCCAAGCTAACACCACCACCCATGAGATCAGCACATACGTCGGCGCTGCCGTTAAAG
GCTCCGTTGCGGGTATGGGTGCCATCATGGGTGCTGCTGCCTTTGCTTTGTTATAAGTTG
CATGGACAACTTAAACTAGGAAGGATATTCCGCTTCATTTCATTAATTTCACATTTTTTT
ATCTACATGATATGTATTTTCCCTCAGTTACCAGATTCGCTAGCTTCGAAGCAAGGACTC
CTTGGTCATACTTAATAAAGGAACGTCTGCTTCATTCTCCTAAAGTTCCTTTCGATAAGG
ACGCAGAAGGCACCTTACTAGACCATTGTATAAACTCATAACTACATACTAATTCAACGA
TATGTTACATTTATTTTCTTGTGGTTACCCCCCGCAAATTTCCAGGCATCTCATCTCATC
GCAGTTAAAAAAAAAAAAGTTGTAAAAAGGTAATAAAGCGATACTTGATGAAAGCAAACA
TCTGTAATAACAGTTCACAAGGTTAAGCTGGTTCGTTTCACTAGCGTATCATTTTTTATT
TTTCAAATAAACAAACGAGGGCGGAGTTTATTGGGTCGTC
Chr coordinates
Chr XIV from 66517-68445
