Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
RPC40
Systematic Name
YPR110C
Alias
RPC5
Strain
S288c
Description
RNA polymerase subunit AC40; common to RNA polymerase I and III; predominant determinant targeting Ty1 integration upstream of Pol III-transcribed genes
External sources
Open in SGD
Open in KEGG
Gene Sequence
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>RPC40 YPR110C
ATGTCAAATATTGTGGGTATTGAATATAACCGTGTAACGAATACAACCTCCACGGATTTT
CCTGGTTTCTCGAAGGATGCAGAAAACGAGTGGAATGTGGAAAAATTCAAAAAGGACTTC
GAAGTCAATATTTCGTCATTAGACGCAAGAGAGGCAAATTTCGACTTGATAAACATTGAC
ACATCGATTGCGAATGCCTTTCGTCGTATAATGATTTCCGAGGTTCCATCCGTGGCTGCT
GAATACGTCTATTTTTTTAACAATACATCCGTTATCCAAGATGAGGTTTTGGCTCATAGA
ATAGGCTTGGTTCCATTAAAAGTTGACCCTGATATGCTCACATGGGTTGATAGTAATTTG
CCGGACGATGAAAAGTTTACGGATGAAAATACTATCGTTTTGAGTTTGAACGTGAAGTGC
ACAAGAAATCCAGATGCTCCAAAGGGATCTACTGATCCAAAGGAACTATATAACAATGCC
CATGTCTACGCCCGTGATTTGAAGTTTGAACCACAGGGCAGACAATCTACCACTTTTGCT
GATTGTCCGGTTGTTCCAGCTGATCCTGATATTTTATTAGCTAAGCTAAGGCCTGGTCAA
GAAATTTCGTTGAAGGCACATTGCATTTTAGGTATCGGTGGTGATCATGCTAAATTTTCA
CCAGTTTCCACCGCTTCTTATAGATTATTACCTCAAATCAATATCTTACAGCCAATCAAA
GGTGAAAGTGCCAGAAGATTTCAAAAATGTTTTCCCCCAGGTGTTATTGGTATTGATGAA
GGTTCAGATGAAGCGTATGTCAAAGATGCTAGGAAGGATACGGTTTCCAGGGAGGTTTTA
AGATACGAAGAGTTTGCTGATAAAGTTAAATTAGGAAGAGTGAGGAACCACTTTATTTTC
AACGTAGAAAGCGCTGGTGCCATGACACCAGAAGAAATTTTTTTCAAATCCGTCAGGATT
TTAAAGAATAAGGCTGAGTATTTGAAAAACTGTCCAATTACCCAATGA
Promoter Sequence
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>RPC40 YPR110C
TGTCCAACTTGTGTCAGTATCTGAAAATCCTTGTGCTTAGGTTTCAACCTCCTTTTTCTC
AGTACTTCGTGTTCTCTTTGCAAATACAAAGCCCATTCTTCATTTAAAACCTTATTAGAA
ACGTTTTTGACACTTCTTTGCTGTTCAAGATATCTTAGCACCTGCTTCGTACGTTGTCTT
CTGCTAATAACATAATCAAACATGTCACAGTAATAGTCGAGAAAGTAAAGTTGGCATACA
TTAACAACTCTCTGGGTTTTACTTTGGGAAGCACGCTCGTGAAAATCCTTGGGTAGCTTC
TTCGGTGAGTGATTCAATGAAATGCGATTTTTGAAGGTATCTTGATCATCTGAATCACAC
GGCTTATATGATCTTGGAAGTCCGGGAGTTAATCTTCCATTTTCGCTCTTTCTAGCAGGC
CTATATTGCGCCTGTGGAGAAGTAGGTTTAGGAATATTCAAATCATAGAACCCTAAATGA
CTCATATTACCAGCCAAATCATCTACCTCTCGATCACTTCGTGAAAACATGACTACCGAA
TTATTGTTGAATACGATATTCTGGGTTGCTAATCACTATTGGAGTTACAAGTTTGTTGCG
ACAATACAGTTCATCATGATCTGTGATCTAGCCGACTACAGGTCCATTGATTTGTGTTTA
CTCTCAAAATCTTGTATGAGGTGTATGGGTTAATTATCCATTCAAAGACAAAAATTTATG
ATCTTGGTGTTTGTATATAAAAATTAGTCAGAAGACATGCTTATTCTTGATTTTATATTA
ATTAGAAAGAGATGTTGCATTATCCCATACTTGTCGTTTGTCTTCTGCTACAATACATTG
TGCTTTATGTTGCAAATATTTATTAATTCCGTTTATAGTGACTTGGATTCACAAAAATTT
TGTGAAAAAATTATTGCGATGAGTTGAAAGAAAAAATTTCACTCATATTATGTAGAAGAG
CAGGTATCAAGTGCATGAAAGTAAGTAGGTGAAAGAAGAT
Chr coordinates
Chr XVI from 746835-745828