The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Pho2p
|
YBR093C
|
PubMed
Vogel K et al., Mol Cell Biol, 1989 May;9(5):2050-7Vogel K et al., Mol Cell Biol, 1989 May;9(5):2050-7 |
N/A |
|
N/A |
S288c |
N/A |
PubMed
Barbaric S et al., Mol Cell Biol, 1998 May;18(5):2629-39Barbaric S et al., Mol Cell Biol, 1998 May;18(5):2629-39 |
Indirect |
LacZ - WT vs TF mutant |
Positive |
S288c |
phosphate starvation; cells grown in phosphate-free synthetic medium |
PubMed
Terrell AR et al., J Biol Chem, 2002 Aug 23;277(34):31038-47Terrell AR et al., J Biol Chem, 2002 Aug 23;277(34):31038-47 |
Direct |
EMSA |
N/A |
S288c |
Phosphate depletion |
PubMed
Neef DW et al., Mol Cell Biol, 2003 Jun;23(11):3788-97Neef DW et al., Mol Cell Biol, 2003 Jun;23(11):3788-97 |
Indirect |
Northern blot - WT vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Springer M et al., PLoS Biol, 2003;():Springer M et al., PLoS Biol, 2003;(): |
Indirect |
Northern blot - WT vs TF mutant |
Positive |
K699 |
Cells were grown in synthetic medium with dextrose (SD) and in high-, intermediate-, or no-phosphate. |
PubMed
Pinson B et al., Genes Dev, 2009 Jun 15;23(12):1399-407Pinson B et al., Genes Dev, 2009 Jun 15;23(12):1399-407 |
Direct |
ChIP |
N/A |
ade16 ade17 double mutant |
SDcasaWAU medium |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - WT vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Kang HJ et al., Biochem J, 2014 Feb 1;457(3):391-400Kang HJ et al., Biochem J, 2014 Feb 1;457(3):391-400 |
Indirect |
Northern blot - WT vs TF mutant |
Positive |
S288c |
Low Pi YPD |
|