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Modelling prediction
Essentiality
[metab] Optimisation
manipulating gene expression
manipulating TF expression
Cross species
Promoter analysis
Homologous network
Network comparison
Rank by Unique TFBS
Rank genes
Rank by TF
Rank by GO
Regulatory Associations
Search for TFs
Search for Genes
Search for Associations
Pattern Matching
Search by DNA Motif
Find TF Binding Site(s)
Utilities
Search for Orthologs
IUPAC Code Generation
ORF List ⇔ Gene List
Retrieve
TF-Consensus List
Regulation Matrix
Upstream Sequence
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Regulation Reference(s)
The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References
Evidence
Code
Evidence
Experiment
Association
Type
Strain
Environmental
Condition
Pho4p
YBR295W
PubMed
Gurvich Y et al., PLoS Biol, 2017 Dec 13;15(12):e2002039
Gurvich Y et al., PLoS Biol, 2017 Dec 13;15(12):e2002039
Indirect
RNA-seq - wt vs TF mutant
Positive
BY4741
BY4741; SC medium; Phosphate(i) starvation condition; 30.C; mid-log phase