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Regulation Reference(s)
The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Yrr1p
|
YGR281W
|
PubMed
Cui Z et al., Mol Microbiol, 1998 Sep;29(5):1307-15Cui Z et al., Mol Microbiol, 1998 Sep;29(5):1307-15 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Le Crom S et al., Mol Cell Biol, 2002 Apr;22(8):2642-9Le Crom S et al., Mol Cell Biol, 2002 Apr;22(8):2642-9 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
Yrr1-GAD chimera cells were cultivated in the presence of 2% galactose to induce protein expression |
PubMed
Lucau-Danila A et al., J Biol Chem, 2003 Dec 26;278(52):52641-50Lucau-Danila A et al., J Biol Chem, 2003 Dec 26;278(52):52641-50 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
BY4742 |
Minimal synthetic medium; early-log phase; Galactose induction; YRR1-GAD is chimeric protein |
PubMed
Onda M et al., Gene, 2004;():Onda M et al., Gene, 2004;(): |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPGal + Adenine |
PubMed
Kodo N et al., Biochem Biophys Res Commun, 2013 Apr 26;434(1):42-7Kodo N et al., Biochem Biophys Res Commun, 2013 Apr 26;434(1):42-7 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
S288c |
SD medium |
PubMed
Gallagher JE et al., Genes Dev, 2014 Feb 15;28(4):409-21Gallagher JE et al., Genes Dev, 2014 Feb 15;28(4):409-21 |
Direct |
ChIP-seq |
N/A |
S288c |
YPGlycerol medium |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
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