S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Rim101p	YIR019C	PubMed Barrales RR et al., Genetics, 2008 Jan;178(1):145-56	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	YPED Low glucose (0,2%) 2h
		PubMed Chavel CA et al., PLoS Genet, 2010 Mar 19;6(3):e1000883	Indirect	RT-PCR - wt vs TF mutant	Negative	SIGMA1278b	wt vs DELTArim101: total RNA was isolated from 25 ml cultures grown in YEP GAL for 8h.
		PubMed Sarode N et al., Eukaryot Cell, 2011 Nov;10(11):1516-26	Indirect	Western blot - wt vs TF overexpression	Positive	S288c	SD medium
		PubMed Scherz K et al., G3 (Bethesda), 2014 Jul 9;4(9):1671-80	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	DELTArim101 grown for 96 hr in square 120-mm Â· 120-mm Petri dishes in Synthetic complete (SC) media and amino acids: adenine sulfate 20 mg/liter; uracil 38 mg/liter; Lhistidine 38 mg/liter; L-arginine 38 mg/liter; L-tryptophan 38 mg/liter; L-methoinine 38 mg/liter; L-tyrosine 15 mg/liter; L-leucine 57 mg/liter;L-isoleucine 57 mg/liter; L-lysine 57 mg/liter; L-phenylalanine 48 mg/liter; L-valine 57
		PubMed Read T et al., PLoS Genet, 2016 Jan 11;12(1):e1005746	Indirect	RNA-seq - wt vs TF mutant	Positive	S288c	Cells were grown in standard YPD media to mid-log phase in YPD before RNA isolation
		PubMed Vandermeulen MD et al., PLoS Genet, 2022 Jan;18(1):e1009988	Indirect	RT-PCR - wt vs. TF mutant	Positive	PC538	YPD 48h, 30.
			Indirect	RT-PCR - wt vs. TF mutant	Positive	PC538	YPGAL 48h, 30.