S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Sfl1p	YIR019C	PubMed van Dyk D et al., Genetics, 2005 Jan;169(1):91-106	Indirect	Northern blot - WT vs TF mutant	Negative	S288c	SCD medium
		PubMed Jin R et al., Mol Biol Cell, 2008 Jan;19(1):284-96	Indirect	GFP - WT vs TF mutant	Negative	S288c	filamentous growth inducing conditions
		PubMed Fischer C et al., FEMS Yeast Res, 2008 Mar;8(2):225-36	Indirect	Northern blot - WT vs TF mutant	Positive	S288c	3-aminotriazole
		PubMed Fichtner L et al., Mol Microbiol, 2007 Dec;66(5):1276-89	Indirect	RT-PCR - WT vs TF mutant	Negative	S288C	wt versus TF mutant Sc media OD:0.7
		PubMed Chavel CA et al., PLoS Genet, 2010 Mar 19;6(3):e1000883	Indirect	RT-PCR - WT vs TF mutant	Negative	SIGMA1278b	wt vs DELTAsfl1: total RNA was isolated from 25 ml cultures grown in YEP GAL for 8h.
		PubMed Torbensen R et al., PLoS One, 2012;7(7):e41272	Indirect	Northern blot - WT vs TF mutant	Negative	S288c	YPD medium; mid-log phase
		PubMed Scherz K et al., G3 (Bethesda), 2014 Jul 9;4(9):1671-80	Indirect	RNA FISH	Negative	S288c	DELTAsfl1 grown for 96 hr in square 120-mm Â· 120-mm Petri dishes in Synthetic complete (SC) media and amino acids: adenine sulfate 20 mg/liter; uracil 38 mg/liter; Lhistidine 38 mg/liter; L-arginine 38 mg/liter; L-tryptophan 38 mg/liter; L-methoinine 38 mg/liter; L-tyrosine 15 mg/liter; L-leucine 57 mg/liter;L-isoleucine 57 mg/liter; L-lysine 57 mg/liter; L-phenylalanine 48 mg/liter; L-valine 57 mg
		PubMed Mayhew D et al., Mol Biol Cell, 2014 Sep 1;25(17):2669-76	Direct	Multiplex calling card analysis	N/A	S288c	Nitrogen starvation
		PubMed Taylor MB et al., PLoS Genet, 2015 Oct 20;11(10):e1005606	Indirect	RT-PCR - WT vs TF mutant	Negative	S288c	S3 and DELTAsfl1 (S3) cells were grown to stationary phase in liquid YPD media at 30.C and pinned on to YPE agar plates. After four days of growth at 30.C, total RNA was extracted with the Qiagen Rneasy kit
		PubMed Regenberg B et al., Proc Biol Sci, 2016 Nov 16;283(1842):	Indirect	RNA FISH	Negative	S288c	DELTAsfl1
		PubMed Cromie GA et al., G3 (Bethesda), 2017 Aug 7;7(8):2845-2854	Indirect	RNA-seq - WT vs TF overexpression	Negative	F45	4 days growth YPD, 30.C