S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Gat1p	YJR152W	PubMed Coffman JA et al., Mol Cell Biol, 1996 Mar;16(3):847-58	Indirect	Northern blot - wt vs TF mutant	Positive	TCY1	Wickerham's minimal medium + proline
		PubMed Georis I et al., J Biol Chem, 2008 Apr 4;283(14):8919-29	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	glutamine
		PubMed Georis I et al., Genetics, 2009 Mar;181(3):861-74	Direct	ChIP	N/A	25T0b, FV090, FV069, FV076, 03740c, 03803c	YNB-glutamine medium treated with rapamycin (0.2 microg/ml) for 30 min
		PubMed Georis I et al., Genetics, 2009 Mar;181(3):861-74	Indirect	RT-PCR - wt vs TF mutant	Positive	FV023	YNB-glutamine medium treated with rapamycin (0.2 microg/ml) for 30 min
		PubMed Georis I et al., Mol Cell Biol, 2011 Jan;31(1):92-104	Direct	ChIP	N/A	S288c	Rapamycin treatment
		PubMed Georis I et al., J Biol Chem, 2011 Dec 30;286(52):44897-912	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Rapamycin treatment
		PubMed Fayyadkazan M et al., Microbiologyopen, 2014 Jun;3(3):271-87	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	cells grown in YPD medium and then treated with rapamycin o transferred to proline medium.
		PubMed Georis I et al., RNA Biol, 2015;12(8):824-37	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	cells grown in YNB medium with glutamine with (Rap) or without (Gln) rapamycin treatment. DAL5 mRNA levels were quantified by quantitative RT-PCR with primer pair DAL5O1-O2.
		PubMed Fayyad-Kazan M et al., Mol Microbiol, 2016 Jan;99(2):360-79	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	cells were grown in am or ammonium and glutamine medium.
		PubMed Zhao X(1,) et al., Sci Rep, 2016;():Zhao X(1,) et al., Sci Rep, 2016;():	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	YNB medium, with glutamine or proline
		PubMed Hong J et al., Elife, 2018 Apr 5;7(0):e32323	Indirect	RNA-seq - wt vs TF mutant	Positive	FY4	Cells cultured in ammonium-limited chemostats