S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Rlm1p	YKL096W	PubMed Jung US et al., Mol Microbiol, 1999 Dec;34(5):1049-57	Indirect	Northern blot - WT vs TF mutant	Positive	EG123	Cells grown to mid-log phase in YEPD, shifted from 23C to 39C
		PubMed Terashima H et al., Mol Gen Genet, 2000;():	Direct	LacZ - WT vs mutant promoter sequence	Positive	YPH499	5 microg/mL doxycycline
		PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Reinoso-MartÃn C et al., Eukaryot Cell, 2003 Dec;2(6):1200-10	Indirect	Northern blot - WT vs TF mutant	Positive	S288c	exposure to the antifungal drug caspofungin
		PubMed GarcÃa R et al., J Biol Chem, 2004 Apr 9;279(15):15183-95	Indirect	Microarray analysis - WT vs TF mutant	Positive	S288c	Congo red
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Workman CT et al., Science, 2006 May 19;312(5776):1054-9	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Capaldi AP et al., Nat Genet, 2008;():Capaldi AP et al., Nat Genet, 2008;():	Indirect	Microarray analysis - WT vs TF mutant	Positive	S288c	YPD medium + 0,4M KCl (salt stress)
		PubMed GarcÃa R et al., J Biol Chem, 2009 Apr 17;284(16):10901-11	Indirect	LacZ - WT vs TF mutant	Positive	BY4741	YPD or SD 0.8 unit/ml zymolyase for 3 h
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF mutant	Negative	S288c	YPD medium; mid-log phase
		PubMed Sanz AB et al., Mol Biol Cell, 2012 Jul;23(14):2805-17	Indirect	Microarray analysis - WT vs TF mutant	Positive	S288c	Congo red
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C