S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Gat1p	YKR034W	PubMed Soussi-Boudekou S et al., Mol Microbiol, 1997 Mar;23(6):1157-68	Indirect	lacZ - wt vs TF mutant	Positive	SIGMA1278b	Minimal medium + NH4+
			Indirect	lacZ - wt vs TF mutant	Positive	SIGMA1278b	Minimal medium + proline
		PubMed Coffman JA et al., J Bacteriol, 1997 Jun;179(11):3416-29	Indirect	Northern blot - wt vs TF mutant	Positive	TCY1	Minimal medium + proline
			Indirect	lacZ - wt vs TF mutant	Positive	TCY1	Minimal medium + proline
		PubMed Georis I et al., Mol Cell Biol, 2009 Jul;29(13):3803-15	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Exponential-phase cells cultivated in synthetic growth medium containing 0.1% proline as nitrogen source
		PubMed Neklesa TK et al., PLoS Genet, 2009 Jun;5(6):e1000515	Indirect	GFP - wt vs TF mutant	Positive	BY4743	15 hour growth in YPD medium containing 20 ng/mL of rapamycin
			Indirect	GFP - wt vs TF mutant	Positive	BY4743	4 hour growth in N-free medium
		PubMed Georis I et al., J Biol Chem, 2011 Dec 30;286(52):44897-912	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Rapamycin treatment
		PubMed Hong J et al., Elife, 2018 Apr 5;7(0):e32323	Direct	EMSA	N/A	FY4	Cells cultured in ammonium-limited chemostats
			Indirect	RNA-seq - wt vs TF mutant	Positive	FY4	Cells cultured in ammonium-limited chemostats
			Indirect	GFP - wt vs TF mutant	Positive	FY4	Cells cultured in ammonium-limited chemostats
			Indirect	GFP - wt vs TF mutant	Positive	FY4	Cells cultured in ammonium-limited chemostats containing ammonium
			Indirect	GFP - wt vs TF mutant	Positive	FY4	Cells cultured in ammonium-limited chemostats containing proline