S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Rlm1p	YKR095W	PubMed Jung US et al., Mol Microbiol, 1999 Dec;34(5):1049-57	Indirect	Northern blot - WT vs TF mutant	Positive	EG123	Cells grown to mid-log phase in raffinose-containing medium, then shifted to galactose-containing medium for 4 h
			Indirect	Northern blot - WT vs TF mutant	Positive	EG123	Cells grown to mid-log phase in YEPD, shifted from 23C to 39C
		PubMed GarcÃa R et al., J Biol Chem, 2004 Apr 9;279(15):15183-95	Indirect	Microarray analysis - WT vs TF mutant	N/A	S288c	N/A
		PubMed Nunez LR et al., J Biol Chem, 2008 Dec 5;283(49):34204-17	Indirect	Northern blot - WT vs TF mutant	Positive	SHY933	75 microm inositol medium (0 h) and shifted to 1 mm choline medium for 3.5 h
		PubMed GarcÃa R et al., J Biol Chem, 2009 Apr 17;284(16):10901-11	Indirect	LacZ - WT vs TF mutant	Positive	BY4741	YPD or SD 0.8 unit/ml zymolyase for 3 h
		PubMed Sanz AB et al., Mol Biol Cell, 2012 Jul;23(14):2805-17	Direct	ChIP	N/A	S288c	Congo red
		PubMed Sanz AB et al., Biochim Biophys Acta Gene Regul Mech, 2018 Nov;1861(11):1029-1039	Direct	ChIP	N/A	BY4741	YP medium 2% glucose + Congo Red (30 microg/ml for 3 h)
			Indirect	LacZ - WT vs TF mutant	Positive	BY4741	YP medium 2% glucose + Congo Red (30 microg/ml for 3 h)