S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Swi5p	YLR286C	PubMed Dohrmann PR et al., Mol Cell Biol, 1996 Apr;16(4):1746-58	Indirect	LacZ - WT vs TF mutant	Positive	S288c	SC medium; mid-log phase
		PubMed Knapp D et al., Mol Cell Biol, 1996 Oct;16(10):5701-7	N/A		N/A	S288c	N/A
		PubMed Toone WM et al., EMBO J, 1995 Dec 1;14(23):5824-32	Indirect	Northern blot - WT vs TF mutant	Positive	W303	YPD
		PubMed Madhani HD et al., Proc Natl Acad Sci U S A, 1999 Oct 26;96(22):12530-5	Direct	ChIP	N/A	S288c	Synchronized cells at G1 phase
		PubMed Pan X et al., Mol Cell Biol, 2000 Nov;20(22):8364-72	Indirect	Northern blot - WT vs TF mutant	Positive	MLY40a	Exponential-phase cells cultivated in nitrogen limited growth medium to induce pseudohyphal differentiation
		PubMed Doolin MT et al., Mol Microbiol, 2001 Apr;40(2):422-32	Indirect	Northern blot - WT vs TF mutant	Negative	H9	Cells grown in YPD media to mid-logarithmic phase
		PubMed Simon I et al., Cell, 2001 Sep 21;106(6):697-708	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Frenz LM et al., Mol Genet Genomics, 2001 Nov;266(3):374-84	Indirect	Northern blot - WT vs TF mutant	Positive	S288c	cells in telophase
		PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Voth WP et al., EMBO J, 2007 Oct 17;26(20):4324-34	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Wu Y et al., FEMS Yeast Res, 2016 May;16(3):	Indirect	Gene overexpression	Positive	S288c	YPD
		PubMed Lupo O et al., G3 (Bethesda), 2021 Feb 9;11(2):	Direct	ChEC-seq	N/A	BY4743	YPD medium
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C