S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Gln3p	YNL142W	PubMed Marini AM et al., Mol Cell Biol, 1997 Aug;17(8):4282-93	Indirect	lacZ - wt vs TF mutant	Positive	S288c	0,1% Glutamine (nitrogen source)
		PubMed Shamji AF et al., Curr Biol, 2000 Dec 14-28;10(24):1574-81	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	30 min 50 nM treatment with rapamycin in YPD
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Hirasaki M et al., Gene, 2008;():Hirasaki M et al., Gene, 2008;():	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	YPAD + 14mM Caffeine 1h
		PubMed Staschke KA et al., J Biol Chem, 2010 May 28;285(22):16893-911	Indirect	Microarray analysis - wt vs TF mutant	Positive	EG328-1A	RNA prepared from wt and DELTAgcn2DELTAgln3 cells treated for 1 h with 200 nM Rapamycin
			Indirect	Microarray analysis - wt vs TF mutant	Positive	EG328-1A	RNA prepared from wt and DELTAgcn4DELTAgln3 cells treated for 1 h with 200 nM Rapamycin
			Indirect	Microarray analysis - wt vs TF mutant	Positive	EG328-1A	RNA prepared from wt and DELTAgln3 cells treated for 1 h with 200 nM Rapamycin
		PubMed Fayyadkazan M et al., Microbiologyopen, 2014 Jun;3(3):271-87	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	cells grown in YPD medium and then treated with rapamycin o transferred to proline medium.
		PubMed Numamoto M et al., J Biosci Bioeng, 2015 Aug;120(2):121-7	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	DELTAgln3 carrying or not a plasmid pRS316-GLN3S391D-Myc13 incubated in YPDA medium, supplemented with 5 mM caffeine for 30 min