The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Mac1p
|
YOL152W
|
PubMed
Martins LJ et al., J Biol Chem, 1998 Sep 11;273(37):23716-21Martins LJ et al., J Biol Chem, 1998 Sep 11;273(37):23716-21 |
Direct |
lacZ - wt vs mutant promoter sequence |
Positive |
S288c |
30 ?Mbathocuproine disulfonate |
PubMed
Gross C et al., J Biol Chem, 2000 Oct 13;275(41):32310-6Gross C et al., J Biol Chem, 2000 Oct 13;275(41):32310-6 |
Indirect |
Microarray analysis - wt vs TF overexpression |
Positive |
S288c |
low copper complete medium |
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Nasuno R et al., PLoS One, 2014 Nov 25;9(11):e113788Nasuno R et al., PLoS One, 2014 Nov 25;9(11):e113788 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
S288c |
100 microM SNAP (S-nitroso-N-acetylpenicillamine) |
PubMed
James Theoga Raj C et al., J Biol Chem, 2019 Apr 5;294(14):5562-5575James Theoga Raj C et al., J Biol Chem, 2019 Apr 5;294(14):5562-5575 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
BY4742 |
SD medium |
PubMed
, , ;():, , ;(): |
Indirect |
RT-PCR - wt vs TF overexpression |
Positive |
1308 |
NO-treated biofilm cells |
Indirect |
RT-PCR - wt vs. TF mutant |
Positive |
1308 |
NO-treated biofilm cells |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
|