S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Ndd1p	YPR119W	PubMed Simon I et al., Cell, 2001 Sep 21;106(6):697-708	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Pic-Taylor A et al., Mol Cell Biol, 2004 Nov;24(22):10036-46	Direct	ChIP	N/A	S288c	growth on galactose
		PubMed Veis J et al., Mol Cell Biol, 2007 Dec;27(23):8364-73	Direct	ChIP	N/A	S288c	N/A
		PubMed Sekiya M et al., Genes Genet Syst, 2009 Aug;84(4):269-76	Indirect	Northern blot - wt vs TF mutant	Positive	YOC4344	fks1-1154 cells and fks1-1154 cells overexpressing NDD1 gene of each strain were incubated in YPGS (YPD with 2% galactose and 0.1% sucrose instead of 2% of glucose) at 25.C for 3h. G1 cells were isolated and cultured in YPGS containing 15 microh/mL nocodazole for 240min at 37.C
		PubMed Darieva Z et al., Mol Cell, 2010 Apr 9;38(1):29-40	Direct	ChIP	N/A	S288c	N/A
		PubMed Darieva Z et al., Mol Cell Biol, 2012 Nov;32(22):4651-61	Direct	ChIP	N/A	S288c	N/A
		PubMed Yelamanchi SK et al., Mol Cell Biol, 2014 Feb;34(4):711-24	Direct	ChIP	N/A	S288c	YPD
		PubMed Edenberg ER et al., Mol Cell Biol, 2014 Feb;34(4):725-38	Direct	ChIP	N/A	S288c	Synchronous growth, YM-1 medium
		PubMed Shi BJ, Biochem J, 2016 Nov 1;473(21):3855-3869	Direct	ChIP	N/A	S288c	Synchronous growth
		PubMed Linke C et al., NPJ Syst Biol Appl, 2017 Mar 6;3(1):	Direct	ChIP	Positive	BY4741	BY4741; YPD medium; 30.C; mid-log phase