S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Aft1p	YKR052C	PubMed De Freitas JM et al., J Biol Chem, 2004 Feb 6;279(6):4450-8	Indirect	RT-PCR - wt vs TF mutant	Positive	BY4741	YPD medium; Cell were grown to early log phase;
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Courel M et al., Mol Cell Biol, 2005 Aug;25(15):6760-71	Indirect	Northern blot WT vs TF mutant	Negative	Y14438	Iron-depleted conditions - Defined medium (iron-limiting and copper-limiting yeast nitrogen base ); 30.C.
			Indirect	Northern blot - wt vs TF mutant	Positive	SCMC01	Iron-depleted conditions - Defined medium (iron-limiting and copper-limiting yeast nitrogen base ); 30.C.
			Indirect	Northern blot - wt vs TF mutant	Negative	Y14438	Iron- replete conditions - Defined medium (iron-limiting and copper-limiting yeast nitrogen base ) with 100uM ferric ammonium sulfate; 30.C.
			Indirect	Microarray analysis - wt vs TF mutant	Negative	Y14438	Iron-depleted conditions - Defined medium (iron-limiting and copper-limiting yeast nitrogen base ); 30.C.
		PubMed Dubacq C et al., Mol Genet Genomics, 2006 Feb;275(2):114-24	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium + 200mM hydroxyurea
		PubMed Pagani MA et al., Mol Microbiol, 2007 Jul;65(2):521-37	Indirect	Microarray analysis - wt vs TF mutant	Negative	BY4741	aft1DELTA versus wt: Cells exposed to 5mM ZnCl2 for 30 minutes in YPD media