S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Aft1p	YOR382W	PubMed Foury F et al., J Biol Chem, 2001 Mar 16;276(11):7762-8	N/A		N/A	S288c	N/A
		PubMed Protchenko O et al., J Biol Chem, 2001 Dec 28;276(52):49244-50	Indirect	Northern blot - wt vs TF overexpression	Positive	S288c	cells grown to mid log phase in synthetic iron-replete medium, expressing a constitutive AFT1 allele
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Courel M et al., Mol Cell Biol, 2005 Aug;25(15):6760-71	Indirect	Microarray WT vs TF mutant	Positive	Y14438	Iron-depleted conditions - Defined medium (iron-limiting and copper-limiting yeast nitrogen base ); 30.C.
			Indirect	Microarray analysis - wt vs TF mutant	Positive	SCMC01	Iron-depleted conditions - Defined medium (iron-limiting and copper-limiting yeast nitrogen base ); 30.C.
		PubMed Pagani MA et al., Mol Microbiol, 2007 Jul;65(2):521-37	Indirect	Microarray analysis - wt vs TF mutant	Positive	BY4741	aft1DELTA versus wt: Cells exposed to 5mM ZnCl2 for 60 minutes in YPD media
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Berthelet S et al., Genetics, 2010 Jul;185(3):1111-28	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD
		PubMed Landstetter N et al., OMICS, 2010 Dec;14(6):651-63	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	Pyrrolidine dithiocarbamate (PDTC) stress
		PubMed Jaehnig EJ et al., Cell Rep, 2013 Jul 11;4(1):174-88	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	N/A
		PubMed Gil FN et al., Environ Microbiol, 2017 Feb;19(2):485-499	Indirect	RT-PCR WT vs TF deletion mutant	Positive	S288c	Alachlor
			Indirect	RT-PCR - wt vs TF mutant	Positive	BY4741	Alachlor
		PubMed Caballero-Molada M et al., Biochem J, 2018 Apr 30;475(8):1523-1534	Indirect	RT-PCR - wt vs TF mutant	Positive	BY4741	SD medium, mid exponential phase
			Indirect	RT-PCR - wt vs TF mutant	Positive	BY4741	Cells cultured to mid-exponential phase in SD medium