S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Bas1p	YMR300C	PubMed Denis V et al., Mol Microbiol, 1998 Nov;30(3):557-66	Indirect	lacZ - wt vs TF mutant	Positive	L3079	SD media, mid-exponential
		PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	SC medium; mid-log phase
		PubMed Subramanian M et al., Mol Microbiol, 2005 Jul;57(1):53-69	Indirect	Northern blot - wt vs TF mutant	Negative	S288c	Minimal B medium upon glycine removal
		PubMed Som I et al., Eukaryot Cell, 2005 Oct;4(10):1725-35	Direct	ChIP	N/A	S288c	Exponential-phase cells cultivated in SC growth medium without adenine
		PubMed Workman CT et al., Science, 2006 May 19;312(5776):1054-9	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Koehler RN et al., Eukaryot Cell, 2007 Aug;6(8):1474-85	Indirect	lacZ - wt vs TF mutant	Positive	S288c	medium lacking adenine (derepressing conditions)
		PubMed Goh WS et al., PLoS Comput Biol, 2010 Jan 22;6(1):e1000649	Direct	ChIP	N/A	S288c	N/A
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Fendt SM et al., Mol Syst Biol, 2010;():	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Chubukov V et al., Proc Natl Acad Sci U S A, 2012 Mar 27;109(13):5127-32	Indirect	GFP - wt vs TF mutant	Positive	S288c	adenine depletion
		PubMed Zhu X et al., Genetics, 2015 Oct;201(2):525-42	Indirect	RNA-seq - wt vs TF mutant	Positive	S288c	YPA
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C