S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Cat8p	YCR010C	PubMed Haurie V et al., J Biol Chem, 2001 Jan 5;276(1):76-85	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	Diauxic shift; Cells cultivated in YNB growth medium and harvested after glucose exhaustion
		PubMed Tachibana C et al., Mol Cell Biol, 2005 Mar;25(6):2138-46	Direct	ChIP	N/A	S288c	Growth in glucose derepression conditions (0.05% glucose)
		PubMed Tachibana C et al., J Biol Chem, 2007 Dec 28;282(52):37308-15	Direct	ChIP	N/A	S288c	0,05% glucose 6h
		PubMed Biddick RK et al., PLoS One, 2008 Jan 16;3(1):e1436	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Glucose starvation; Exponential cells cultivated in SM with 0.05% glucose
		PubMed Abate G et al., Biochim Biophys Acta, 2012 May;1819(5):419-27	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	YPD medium - glucose derepression (0,05%)
		PubMed Parua PK et al., J Biol Chem, 2014 Dec 19;289(51):35542-60	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	YP medium + 0.05% glucose
		PubMed Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000	Direct	ChIP-exo	N/A	CEN.PK 113-5D	Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Cells were cultivated in chemostats in nitrogen limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h