S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Cat8p	YLR377C	PubMed Rahner A et al., Nucleic Acids Res, 1996 Jun 15;24(12):2331-7	Indirect	lacZ - wt vs TF mutant	Positive	JS91.15-23	SC medium 0.2% glucose
		PubMed Vincent O et al., EMBO J, 1998 Dec 1;17(23):7002-8	Indirect	lacZ - wt vs TF mutant	Positive	S288c	2% glycerol 2% ethanol 5h30min
		PubMed Haurie V et al., J Biol Chem, 2001 Jan 5;276(1):76-85	Indirect	Proteomics - wt vs TF mutant	Positive	S288c	Diauxic shift; Cells cultivated in YNB growth medium 25 minutes after glucose exhaustion
		PubMed Zaragoza O et al., Biochem J, 2001;():Zaragoza O et al., Biochem J, 2001;():	Direct	EMSA	N/A	W303-1A	In vitro; interaction of protein extracts of cells grown overnight in YP medium containing 2% ethanol with UAS2 (upsteam activating sequence 2) of FBP1
			Indirect	lacZ - wt vs TF mutant	Positive	W303-1A	Cells expressing FBP1-lacZ, UAS1-lacZ or UAS2-lacZ (upsteam activating sequences 1/2 of FBP1) grown in YP medium containing 2% ethanol
		PubMed Tachibana C et al., Mol Cell Biol, 2005 Mar;25(6):2138-46	Direct	ChIP	N/A	S288c	Growth in glucose derepression conditions (0.05% glucose)
		PubMed Tachibana C et al., J Biol Chem, 2007 Dec 28;282(52):37308-15	Direct	ChIP	N/A	S288c	0,05% glucose 6h
		PubMed Biddick RK et al., PLoS One, 2008 Jan 16;3(1):e1436	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Glucose starvation; Exponential cells cultivated in SM with 0.05% glucose
		PubMed Braun KA et al., Mol Cell Biol, 2013 Feb;33(4):712-24	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	YP + 0,05% glucose
		PubMed Han BK et al., J Biol Chem, 2013 Jul 12;288(28):20633-45	Direct	ChIP	N/A	S288c	Cells grown in ethanol medium for 15.5 h after shift from YPD
		PubMed Gasmi N et al., Genetics, 2014 Oct;198(2):547-60	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	0.2%Glucose+ 2% ethanol
		PubMed Parua PK et al., J Biol Chem, 2014 Dec 19;289(51):35542-60	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	YP medium + 0.05% glucose
		PubMed Mehlgarten C et al., PLoS One, 2015 Oct 6;10(10):e0139464	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Grown in glucose and shifted to 3% ethanol for two hours
		PubMed Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000	Direct	ChIP-exo	N/A	CEN.PK 113-5D	Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Cells were cultivated in chemostats in nitrogen limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
			Direct	ChIP-exo	N/A	CEN.PK 113-5D	Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h